Detailed information NTG0423508

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: IE382_RS13760
• Genome accession: NZ_CP061870
• Coordinates: 2551015..2552151 (+)
• Length: 378 a.a.
• NCBI ID: WP_242304353.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain FX-1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2546015..2557151

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IE382_RS13735 (IE382_13670)	-	2546036..2546857 (+)	822	WP_086352580.1	hypothetical protein	-
IE382_RS13740 (IE382_13675)	yomE	2546894..2548828 (+)	1935	WP_109962766.1	phosphodiester glycosidase family protein	-
IE382_RS13745 (IE382_13680)	blyA	2549002..2550105 (+)	1104	WP_242304351.1	N-acetylmuramoyl-L-alanine amidase BlyA	-
IE382_RS13750 (IE382_13685)	-	2550222..2550614 (+)	393	WP_017696898.1	hypothetical protein	-
IE382_RS13755 (IE382_13690)	-	2550636..2550887 (+)	252	WP_017696899.1	phage holin	-
IE382_RS13760 (IE382_13695)	rapC	2551015..2552151 (+)	1137	WP_242304353.1	aspartate phosphatase	Regulator
IE382_RS13765 (IE382_13700)	-	2552141..2552317 (+)	177	WP_017696901.1	hypothetical protein	-
IE382_RS13770 (IE382_13705)	-	2552359..2553609 (-)	1251	WP_242304356.1	UV damage repair protein UvrX	-
IE382_RS13775 (IE382_13710)	-	2553602..2553934 (-)	333	WP_109962767.1	YolD-like family protein	-
IE382_RS13780 (IE382_13715)	-	2554098..2555585 (-)	1488	WP_224443637.1	PIN domain-containing protein	-
IE382_RS13785 (IE382_13720)	-	2555848..2555931 (+)	84	WP_082786706.1	putative holin-like toxin	-
IE382_RS13790 (IE382_13725)	-	2556219..2556752 (-)	534	WP_019712872.1	GNAT family protein	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 44861.10 Da
• Isoelectric Point: 4.9383

>NTDB_id=423508 IE382_RS13760 WP_242304353.1 2551015..2552151(+) (rapC) [Bacillus subtilis strain FX-1]
MEQMISSSKVGVKINEWYKYIRLFSVPDSEILKAEVEEEIRHMKEDQDLLLYYSLMCFRHQLMLDYLEPKTLNEERPKIS
DLLEKIESSQTDLKGILEYYFNFFRGMYEFEQYEYLNAISFYKQAERKLSLVADEIERAEFHYKVAEIYYHMKQTHMSMH
HIVQAIDSYKAHENYTVRVIQCSFVIGLNYLDMDYPEKAIPHFKDALDKAREIDMSRLIGSSLYNLGLCSFAEEAYEKAA
EYFKEGIRVFQDNGYEHSNRLLDILLMLTKTTFKMRNHSEGISWCAHGLSLSEDLNDEIMTKMFEFIHALYVDNDKEKLN
SILNYLELKSMLSDVEDLASDAAKYYNEKEDHKVAVAYYEKVLYARKQIQRGDCLYET

Nucleotide

• Length: 1137 bp

>NTDB_id=423508 IE382_RS13760 WP_242304353.1 2551015..2552151(+) (rapC) [Bacillus subtilis strain FX-1]
ATGGAGCAGATGATCTCTTCTTCTAAAGTTGGAGTGAAAATAAATGAGTGGTATAAATACATAAGATTATTTAGTGTCCC
AGATTCGGAAATATTGAAAGCTGAGGTCGAGGAAGAAATAAGGCATATGAAAGAAGATCAAGATTTATTGCTGTACTATT
CTCTCATGTGTTTTCGCCATCAGCTGATGCTGGACTACCTTGAACCAAAAACATTGAACGAAGAACGACCTAAAATTTCA
GACTTATTAGAAAAGATCGAAAGTAGTCAAACTGATTTGAAAGGGATTCTTGAATATTATTTTAACTTTTTCCGGGGAAT
GTATGAATTTGAACAATACGAATATCTTAATGCCATAAGCTTCTATAAGCAAGCCGAGAGAAAATTATCACTTGTTGCAG
ATGAAATTGAAAGAGCTGAATTCCACTATAAAGTTGCAGAAATTTATTATCATATGAAGCAAACACATATGTCGATGCAC
CACATTGTTCAAGCAATCGATAGTTATAAAGCACATGAAAACTACACTGTAAGAGTTATTCAATGCTCATTTGTTATCGG
ACTGAACTATTTGGATATGGACTACCCTGAAAAAGCGATCCCTCATTTTAAAGATGCTCTAGATAAAGCAAGAGAAATCG
ATATGTCACGATTAATCGGATCATCTCTGTACAACCTTGGCTTATGTTCATTTGCTGAGGAAGCTTATGAAAAGGCAGCT
GAGTACTTTAAGGAAGGCATTAGAGTATTCCAGGATAATGGGTATGAGCACTCAAATCGTTTATTAGACATCTTACTTAT
GTTGACAAAAACCACATTTAAAATGAGAAATCACTCCGAGGGAATTTCTTGGTGTGCACATGGTCTGTCTTTGTCCGAAG
ATTTAAACGATGAGATTATGACAAAAATGTTTGAATTCATTCATGCCCTATATGTAGATAACGACAAAGAAAAATTAAAT
TCGATTCTAAATTATTTAGAATTAAAGTCAATGCTTTCAGACGTGGAGGATTTAGCATCAGATGCAGCGAAATATTACAA
TGAGAAAGAAGACCATAAAGTGGCTGTTGCTTATTATGAAAAAGTGCTTTATGCCCGTAAACAAATTCAGAGAGGGGATT
GTCTTTATGAAACTTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_8) (343-367)

• Tetratricopeptide repeat (TPR_8) (222-249)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	47.48	99.735	0.474
rapF	Bacillus subtilis subsp. subtilis str. 168	46.316	100	0.466