Detailed information NTG0423452

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: G3580_RS15425
• Genome accession: NZ_CP048836
• Coordinates: 3316344..3317525 (+)
• Length: 393 a.a.
• NCBI ID: WP_173766990.1
• Uniprot ID: A0A6C1B630
• Organism: Nitrogeniibacter mangrovi strain M9-3-2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3311344..3322525

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G3580_RS15400 (G3580_15405)	-	3312152..3312400 (-)	249	WP_173766980.1	YfhL family 4Fe-4S dicluster ferredoxin	-
G3580_RS15405 (G3580_15410)	coaD	3312403..3312906 (-)	504	WP_173766982.1	pantetheine-phosphate adenylyltransferase	-
G3580_RS15410 (G3580_15415)	rsmD	3312903..3313442 (-)	540	WP_173766984.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
G3580_RS15415 (G3580_15420)	-	3313439..3314803 (-)	1365	WP_173766986.1	pitrilysin family protein	-
G3580_RS15420 (G3580_15425)	-	3314816..3316144 (-)	1329	WP_228720687.1	pitrilysin family protein	-
G3580_RS15425 (G3580_15430)	pilA	3316344..3317525 (+)	1182	WP_173766990.1	signal recognition particle-docking protein FtsY	Machinery gene
G3580_RS15430 (G3580_15435)	-	3317522..3318184 (+)	663	WP_173766992.1	cell division ATP-binding protein FtsE	-
G3580_RS15435 (G3580_15440)	ftsX	3318184..3319083 (+)	900	WP_173768841.1	permease-like cell division protein FtsX	-

Sequence

Protein

• Length: 393 a.a.
• Molecular weight: 41925.68 Da
• Isoelectric Point: 4.8700

>NTDB_id=423452 G3580_RS15425 WP_173766990.1 3316344..3317525(+) (pilA) [Nitrogeniibacter mangrovi strain M9-3-2]
MFGFFKKSARKDTPETPADEAGAGQDINEAPTEVAIEPTEAPAVPATEPLPDAPSGPAPTADEPAREAEHDAPTEVPPRP
EAVPAPAKPSWRDRLKAGLSRTRSGLAGMFGLRKIDEELLEDLESTLLMADCGIEATAHLIEALRTRWKRDHLETADQLQ
AALVEELTALLAPLEAELDVNTAHPFVIMIAGINGSGKTTSIGKLAKWYQGQGKKVLLAAGDTFRAAAREQLMTWGERNG
VDVIAQESGDPAAVVFDAVNAARARNIDIVLADTAGRLPTQSHLMDEIAKVRRVITKVDATAPHEVLLVLDANIGQNALA
QVRAFDAAVNVTGLVITKLDGTAKGGVLAAIARQCPKPLRFIGVGEGIDDLRPFHAREFVDALFAKSEAQKRP

Nucleotide

• Length: 1182 bp

>NTDB_id=423452 G3580_RS15425 WP_173766990.1 3316344..3317525(+) (pilA) [Nitrogeniibacter mangrovi strain M9-3-2]
ATGTTTGGTTTCTTCAAGAAATCCGCCCGCAAAGATACGCCCGAGACGCCCGCCGATGAGGCCGGCGCCGGGCAGGACAT
CAACGAGGCGCCCACCGAGGTGGCCATCGAGCCGACCGAAGCCCCCGCCGTGCCGGCCACGGAACCGTTGCCGGACGCGC
CGTCCGGACCCGCGCCGACCGCCGATGAGCCCGCCCGCGAGGCCGAGCACGATGCCCCGACCGAGGTGCCGCCCCGCCCC
GAGGCGGTGCCCGCGCCCGCCAAACCGTCCTGGCGCGACCGCCTCAAGGCCGGCCTGTCGCGCACGCGCAGCGGTCTGGC
CGGCATGTTCGGCCTGCGCAAGATCGACGAGGAGTTGCTCGAGGATCTCGAAAGCACCCTGCTGATGGCCGACTGTGGCA
TCGAGGCCACCGCCCACCTGATCGAGGCCCTGCGCACCCGCTGGAAGCGCGACCACCTGGAGACGGCCGATCAGTTGCAG
GCTGCCCTGGTCGAAGAGCTGACCGCCCTGCTCGCACCGCTCGAAGCGGAGCTGGACGTCAATACGGCCCACCCCTTCGT
GATCATGATCGCGGGCATCAACGGCTCGGGTAAGACCACCTCCATCGGCAAACTCGCCAAGTGGTATCAGGGCCAGGGCA
AGAAGGTGCTGCTGGCGGCCGGCGACACCTTCCGCGCCGCGGCCCGCGAACAGCTCATGACCTGGGGCGAGCGCAACGGG
GTGGACGTGATCGCCCAGGAGTCGGGCGATCCGGCCGCCGTCGTGTTCGACGCGGTCAACGCCGCCCGCGCCCGCAACAT
CGACATCGTGCTGGCCGACACCGCCGGGCGCCTGCCCACCCAGAGCCATCTCATGGACGAGATCGCCAAGGTGCGCCGCG
TGATCACCAAGGTGGACGCCACCGCACCGCACGAGGTGCTGCTGGTGCTCGACGCCAACATCGGCCAGAACGCGCTGGCA
CAGGTGCGCGCCTTCGACGCCGCGGTCAATGTCACCGGCCTGGTCATCACCAAGCTCGACGGCACCGCCAAGGGCGGCGT
GCTCGCGGCCATCGCCCGCCAGTGTCCCAAGCCGCTGCGCTTCATCGGCGTGGGCGAAGGCATCGACGACCTGCGCCCCT
TCCACGCGCGCGAGTTCGTCGACGCCCTGTTCGCCAAGTCCGAGGCGCAGAAGCGCCCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (106-167)

• SRP54-type protein, GTPase domain (SRP54) (185-384)

3D structure

• AlphaFold DB: A0A6C1B630

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.923	100	0.55