Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | G3R47_RS16730 | Genome accession | NZ_CP048827 |
| Coordinates | 3470686..3471111 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788337.1 | Uniprot ID | A0A009SG52 |
| Organism | Acinetobacter baumannii strain ABF9692 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3465686..3476111
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G3R47_RS16700 (G3R47_16670) | - | 3466216..3467250 (+) | 1035 | WP_001189446.1 | lipase secretion chaperone | - |
| G3R47_RS16705 (G3R47_16675) | - | 3467365..3468306 (+) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| G3R47_RS16710 (G3R47_16680) | rplS | 3468358..3468726 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| G3R47_RS16715 (G3R47_16685) | trmD | 3468934..3469674 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| G3R47_RS16720 (G3R47_16690) | rimM | 3469720..3470268 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| G3R47_RS16725 (G3R47_16695) | rpsP | 3470288..3470539 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| G3R47_RS16730 (G3R47_16700) | pilE | 3470686..3471111 (-) | 426 | WP_000788337.1 | type IV pilin protein | Machinery gene |
| G3R47_RS16735 (G3R47_16705) | pilY2 | 3471108..3471590 (-) | 483 | WP_001046421.1 | type IV pilin protein | Machinery gene |
| G3R47_RS16740 (G3R47_16710) | pilY1 | 3471603..3475457 (-) | 3855 | WP_020753491.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15163.36 Da Isoelectric Point: 7.8144
>NTDB_id=423335 G3R47_RS16730 WP_000788337.1 3470686..3471111(-) (pilE) [Acinetobacter baumannii strain ABF9692]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=423335 G3R47_RS16730 WP_000788337.1 3470686..3471111(-) (pilE) [Acinetobacter baumannii strain ABF9692]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.78 |
100 |
0.908 |
| comF | Acinetobacter baylyi ADP1 |
50 |
99.291 |
0.496 |