Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   BAMOH1_RS07595 Genome accession   NZ_CP061853
Coordinates   1514113..1515135 (+) Length   340 a.a.
NCBI ID   WP_012117493.1    Uniprot ID   A7Z4C8
Organism   Bacillus amyloliquefaciens strain MOH1-5b     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1509113..1520135
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAMOH1_RS07560 (BAMOH1_07560) - 1509473..1509712 (+) 240 WP_003154475.1 YlbE-like family protein -
  BAMOH1_RS07565 (BAMOH1_07565) ylbF 1509783..1510232 (+) 450 WP_003154472.1 YlbF family regulator Regulator
  BAMOH1_RS07570 (BAMOH1_07570) - 1510291..1510563 (+) 273 WP_014417705.1 YlbG family protein -
  BAMOH1_RS07575 (BAMOH1_07575) rsmD 1510862..1511416 (+) 555 WP_007409693.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  BAMOH1_RS07580 (BAMOH1_07580) coaD 1511421..1511903 (+) 483 WP_014417707.1 pantetheine-phosphate adenylyltransferase -
  BAMOH1_RS07585 (BAMOH1_07585) ylbJ 1511922..1513148 (-) 1227 WP_053573413.1 sporulation integral membrane protein YlbJ -
  BAMOH1_RS07590 (BAMOH1_07590) - 1513328..1514107 (+) 780 WP_014304961.1 patatin family protein -
  BAMOH1_RS07595 (BAMOH1_07595) sepM 1514113..1515135 (+) 1023 WP_012117493.1 SepM family pheromone-processing serine protease Regulator
  BAMOH1_RS07600 (BAMOH1_07600) - 1515154..1516401 (-) 1248 WP_191389727.1 nucleotidyltransferase -
  BAMOH1_RS07605 (BAMOH1_07605) - 1516610..1517128 (+) 519 WP_007611260.1 DUF177 domain-containing protein -
  BAMOH1_RS07610 (BAMOH1_07610) rpmF 1517150..1517329 (+) 180 WP_003154457.1 50S ribosomal protein L32 -
  BAMOH1_RS07615 (BAMOH1_07615) gerR 1517488..1518063 (+) 576 WP_014417712.1 sporulation-specific transcriptional regulator GerR -
  BAMOH1_RS07620 (BAMOH1_07620) - 1518104..1518586 (-) 483 WP_007611262.1 N-acetyltransferase -
  BAMOH1_RS07625 (BAMOH1_07625) - 1518749..1519630 (+) 882 WP_022553382.1 2-dehydropantoate 2-reductase -

Sequence


Protein


Download         Length: 340 a.a.        Molecular weight: 37434.97 Da        Isoelectric Point: 7.3836

>NTDB_id=423323 BAMOH1_RS07595 WP_012117493.1 1514113..1515135(+) (sepM) [Bacillus amyloliquefaciens strain MOH1-5b]
MKAKHFRWVFIILILLIAVTFIKLPYYITQPGEASELRPLIKVDGGYPEKGSLSLMTVKVGPANPYTYLWAKVHPYDEIV
PDESIKEEGESDSDYMKRQLQMMKSSQENAVIAAYQKAGKQVKYSFNGIYASSVVSDMPAKGKIEVGDKIISADGKTYES
AEKLIDYISSKKAGEKVTFHIERDTKEKTVDIVLKSFPDDPKRAGIGVALYTDRNVKVKPDLHFSIENIGGPSAGLMMSL
EIYNQLTKPDETKGYNIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGAENSDYKNAVKTAKAIKSDMKIV
PVDTMQDALDYLDQLKVKST

Nucleotide


Download         Length: 1023 bp        

>NTDB_id=423323 BAMOH1_RS07595 WP_012117493.1 1514113..1515135(+) (sepM) [Bacillus amyloliquefaciens strain MOH1-5b]
ATGAAAGCAAAACATTTTCGCTGGGTGTTTATCATCCTGATCTTATTAATCGCTGTTACATTTATTAAGCTTCCGTATTA
CATCACACAGCCGGGAGAAGCATCAGAGCTGAGACCGCTGATTAAGGTGGACGGAGGCTATCCTGAAAAAGGAAGCCTTT
CCTTGATGACTGTCAAAGTAGGCCCTGCCAATCCGTATACATATCTTTGGGCGAAAGTGCATCCTTACGATGAAATCGTC
CCTGACGAAAGCATAAAAGAAGAGGGCGAATCGGACTCGGATTATATGAAGCGCCAGCTGCAAATGATGAAAAGCTCCCA
AGAAAACGCGGTCATTGCCGCTTATCAAAAAGCCGGGAAACAGGTGAAATACTCATTTAACGGCATTTATGCCAGCTCAG
TCGTCTCTGACATGCCGGCAAAAGGAAAAATAGAGGTCGGTGATAAAATCATCAGCGCGGACGGGAAAACATACGAATCC
GCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGGGAAAAAGTAACGTTTCACATTGAACGGGACACGAAAGA
AAAGACCGTTGACATTGTGCTGAAATCATTCCCGGACGACCCGAAAAGAGCGGGAATCGGCGTCGCGTTATATACGGACC
GGAACGTGAAAGTGAAGCCGGATCTTCATTTCAGCATTGAAAACATCGGCGGGCCTTCTGCGGGTCTCATGATGTCTTTA
GAAATTTACAACCAGCTGACAAAACCTGACGAAACAAAAGGCTATAATATAGCCGGAACGGGGACAATCGACGTGGACGG
CAAAGTCGGACCGATCGGCGGAATCGATCAGAAAGTCGTCGCCGCAGACAAAGCGGGAAAAGATATTTTCTTTGCGCCGA
ATCAAAACGGAGCTGAAAATTCTGATTACAAAAATGCGGTAAAAACGGCGAAAGCAATCAAGTCCGATATGAAGATCGTC
CCTGTCGACACCATGCAGGACGCACTTGACTATTTGGATCAGCTGAAAGTAAAAAGCACCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A7Z4C8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

38.953

100

0.394