Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   BAMOH1_RS00225 Genome accession   NZ_CP061853
Coordinates   42769..43596 (+) Length   275 a.a.
NCBI ID   WP_191389403.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain MOH1-5b     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 37769..48596
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAMOH1_RS00200 (BAMOH1_00200) - 38844..40277 (+) 1434 WP_095061652.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  BAMOH1_RS00205 (BAMOH1_00205) tmk 40274..40912 (+) 639 WP_061861758.1 dTMP kinase -
  BAMOH1_RS00210 (BAMOH1_00210) darA 40983..41312 (+) 330 WP_004264734.1 cyclic di-AMP receptor DarA -
  BAMOH1_RS00215 (BAMOH1_00215) - 41325..41765 (+) 441 WP_004264730.1 YaaR family protein -
  BAMOH1_RS00220 (BAMOH1_00220) holB 41777..42766 (+) 990 WP_007409919.1 DNA polymerase III subunit delta' -
  BAMOH1_RS00225 (BAMOH1_00225) yaaT 42769..43596 (+) 828 WP_191389403.1 competence/sporulation regulator complex protein RicT Regulator
  BAMOH1_RS00230 (BAMOH1_00230) yabA 43611..43970 (+) 360 WP_004264720.1 replication initiation-control protein YabA -
  BAMOH1_RS00235 (BAMOH1_00235) - 44031..44774 (+) 744 WP_022552468.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  BAMOH1_RS00240 (BAMOH1_00240) - 44761..45060 (+) 300 WP_022552469.1 GIY-YIG nuclease family protein -
  BAMOH1_RS00245 (BAMOH1_00245) rsmI 45035..45916 (+) 882 WP_022552470.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  BAMOH1_RS00250 (BAMOH1_00250) abrB 45966..46256 (-) 291 WP_169510469.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31107.88 Da        Isoelectric Point: 4.5932

>NTDB_id=423267 BAMOH1_RS00225 WP_191389403.1 42769..43596(+) (yaaT) [Bacillus amyloliquefaciens strain MOH1-5b]
MYNVIGVRFKKAGKIYYFDPNGFDIEQDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFEVCQKKVADHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDLGEMITTANGPAKVVGLNI
LERVLQVELKNCEKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=423267 BAMOH1_RS00225 WP_191389403.1 42769..43596(+) (yaaT) [Bacillus amyloliquefaciens strain MOH1-5b]
TTGTACAACGTAATAGGCGTTCGCTTTAAAAAAGCGGGAAAAATTTATTATTTTGATCCGAACGGATTTGATATAGAACA
AGACAGCTGCGTCATTGTTGAAACCGTAAGAGGTGTCGAATACGGGCAGGTTGTCATCGCAAATAAACAAGTGGACGAGC
ATGATGTTGTGCTTCCGCTTCGAAAGGTCATACGCGTTGCTGATGAACGCGATCTTCTCATTGTAGAAGAAAACAAACAG
GAGGCCTTGTCCGCTTTTGAAGTCTGTCAGAAAAAAGTGGCTGACCACGGCTTAGATATGAAGCTGGTTGATGTTGAGTT
TACATTTGACCGCAATAAAGTCATTTTTTACTTTACAGCAGACGGACGGGTAGATTTCAGGGAATTGGTCAAAGACTTGG
CTTCTATCTTTAAAACGAGAATCGAATTGCGCCAAATCGGGGTGAGGGACGAGGCGAAAATGCTCGGCGGTATCGGACCA
TGCGGGAGAATGCTTTGCTGCTCCACGTTCCTCGGTGATTTTGAACCGGTGTCCATCAAAATGGCGAAGGATCAAAATTT
ATCGTTGAACCCAACGAAGATTTCCGGTCTGTGCGGCCGTTTGATGTGCTGTTTGAAGTACGAAAATGATGAGTATGAGA
CGGCAAAAGAACAGCTGCCGGATTTAGGCGAAATGATTACGACGGCAAACGGCCCCGCAAAGGTTGTCGGTCTTAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGAAGAATTGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

96.364

100

0.964