Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   G4D59_RS10895 Genome accession   NZ_CP048811
Coordinates   2148016..2148819 (-) Length   267 a.a.
NCBI ID   WP_008342226.1    Uniprot ID   A0A5K1NAR3
Organism   Bacillus altitudinis strain SCU11     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 2143016..2153819
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4D59_RS10880 (G4D59_10835) - 2145232..2145468 (+) 237 WP_017357960.1 DUF2627 domain-containing protein -
  G4D59_RS10885 (G4D59_10840) - 2145502..2146239 (-) 738 WP_017367573.1 glycerophosphodiester phosphodiesterase -
  G4D59_RS10890 (G4D59_10845) - 2146466..2147566 (-) 1101 WP_173962610.1 Rap family tetratricopeptide repeat protein -
  G4D59_RS10895 (G4D59_10850) spo0A 2148016..2148819 (-) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  G4D59_RS10900 (G4D59_10855) spoIVB 2149103..2150380 (-) 1278 WP_017367575.1 SpoIVB peptidase -
  G4D59_RS10905 (G4D59_10860) recN 2150579..2152312 (-) 1734 WP_017367576.1 DNA repair protein RecN Machinery gene
  G4D59_RS10910 (G4D59_10865) ahrC 2152347..2152796 (-) 450 WP_007501163.1 transcriptional regulator AhrC/ArgR -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 29891.41 Da        Isoelectric Point: 6.3918

>NTDB_id=423208 G4D59_RS10895 WP_008342226.1 2148016..2148819(-) (spo0A) [Bacillus altitudinis strain SCU11]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVSHRSSSIQNSVLRSKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=423208 G4D59_RS10895 WP_008342226.1 2148016..2148819(-) (spo0A) [Bacillus altitudinis strain SCU11]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACCAAACAG
CCAAGTGTCATTATGCTGACGGCTTTCGGACAAGAAGACGTAACGAAAAAAGCAGTCGATTTGGGCGCATCCTATTTCAT
TTTGAAACCATTCGATATGGAAAACCTCGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCAGCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGCAGCAAACCTGAACCGAAACGTAAGAACTTAGATGCGAGCATTACGACGATT
ATTCATGAGATTGGCGTGCCAGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGATAT
TGAACTACTCGGCAGTATTACAAAAGTGTTGTACCCAGACATTGCAAAGAAATTTAACACGACAGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTGGCTTGGAGCAGAGGGAATATTGACTCCATTTCGTCACTCTTTGGCTACACAGTC
AGCATGTCAAAAGCCAAACCGACCAATTCCGAATTTATTGCCATGGTGGCTGATCGACTGCGCTTAGAGCATAGAGCAAG
CTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5K1NAR3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884


Multiple sequence alignment