Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | BAINH2_RS06185 | Genome accession | NZ_CP061852 |
| Coordinates | 1224053..1225189 (+) | Length | 378 a.a. |
| NCBI ID | WP_087920760.1 | Uniprot ID | A7Z3N2 |
| Organism | Bacillus amyloliquefaciens strain INH2-4b | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1219053..1230189
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BAINH2_RS06165 (BAINH2_06165) | - | 1219502..1220947 (+) | 1446 | WP_053573480.1 | tagaturonate reductase | - |
| BAINH2_RS06170 (BAINH2_06170) | - | 1220944..1222437 (+) | 1494 | WP_053573481.1 | UxaA family hydrolase | - |
| BAINH2_RS06175 (BAINH2_06175) | - | 1222471..1223235 (-) | 765 | WP_007610763.1 | sulfite exporter TauE/SafE family protein | - |
| BAINH2_RS06180 (BAINH2_06180) | - | 1223380..1223847 (-) | 468 | WP_015417279.1 | DinB family protein | - |
| BAINH2_RS06185 (BAINH2_06185) | rapC | 1224053..1225189 (+) | 1137 | WP_087920760.1 | Rap family tetratricopeptide repeat protein | Regulator |
| BAINH2_RS06190 (BAINH2_06190) | - | 1225179..1225313 (+) | 135 | WP_003154881.1 | PhrA family phosphatase inhibitor | - |
| BAINH2_RS06195 (BAINH2_06195) | - | 1225456..1226409 (+) | 954 | WP_015417280.1 | N-acetylmuramoyl-L-alanine amidase | - |
| BAINH2_RS06200 (BAINH2_06200) | - | 1226447..1226824 (-) | 378 | WP_007610770.1 | PH domain-containing protein | - |
| BAINH2_RS06205 (BAINH2_06205) | - | 1226935..1227537 (+) | 603 | WP_053573482.1 | poly-gamma-glutamate hydrolase family protein | - |
| BAINH2_RS06210 (BAINH2_06210) | - | 1227608..1228444 (+) | 837 | WP_015417282.1 | manganese catalase family protein | - |
| BAINH2_RS06215 (BAINH2_06215) | - | 1228466..1229056 (-) | 591 | WP_007407286.1 | ImmA/IrrE family metallo-endopeptidase | - |
| BAINH2_RS06220 (BAINH2_06220) | xre | 1229205..1229543 (-) | 339 | WP_003154871.1 | HTH-type transcriptional regulator Xre | - |
| BAINH2_RS06225 (BAINH2_06225) | - | 1229734..1229913 (+) | 180 | WP_031378816.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 378 a.a. Molecular weight: 45073.28 Da Isoelectric Point: 4.9159
>NTDB_id=423165 BAINH2_RS06185 WP_087920760.1 1224053..1225189(+) (rapC) [Bacillus amyloliquefaciens strain INH2-4b]
MRMKQTIPSSFVGLKINEWYTHIRQFHVLEAERVKREVEREIEDMEEDQDLLLYYSLMEFRHRVMLDYIKPLKEDPSQPE
FSELLEDIEGNQYKLTGLLDYYFNFFRGMYEFKQKMFLNAMMYYKRAEKNLALVSDDIEKAEFAFKMAEIFYNLKQTYVS
MSYAVQALETYQSYETYNVRRIQCEFVIAGNYDDMQYPERALPHLELALDLAKQEGNPRLISSALYNLGNCYEKMGDLSK
AAEYFETSVSICRSEKFDNLPHSIYSLTQVLYKQNTTAEAEKQYRLGLSIAREYNDELFVNLFQFLHALYGKEMDNASVR
HTFDFLEEHMLYPYVEELAHDAAKFYMKHGQPEKALTFYEKMVHAQKQIQRGDCLYEI
MRMKQTIPSSFVGLKINEWYTHIRQFHVLEAERVKREVEREIEDMEEDQDLLLYYSLMEFRHRVMLDYIKPLKEDPSQPE
FSELLEDIEGNQYKLTGLLDYYFNFFRGMYEFKQKMFLNAMMYYKRAEKNLALVSDDIEKAEFAFKMAEIFYNLKQTYVS
MSYAVQALETYQSYETYNVRRIQCEFVIAGNYDDMQYPERALPHLELALDLAKQEGNPRLISSALYNLGNCYEKMGDLSK
AAEYFETSVSICRSEKFDNLPHSIYSLTQVLYKQNTTAEAEKQYRLGLSIAREYNDELFVNLFQFLHALYGKEMDNASVR
HTFDFLEEHMLYPYVEELAHDAAKFYMKHGQPEKALTFYEKMVHAQKQIQRGDCLYEI
Nucleotide
Download Length: 1137 bp
>NTDB_id=423165 BAINH2_RS06185 WP_087920760.1 1224053..1225189(+) (rapC) [Bacillus amyloliquefaciens strain INH2-4b]
TTGAGGATGAAGCAGACTATTCCGTCCTCTTTTGTCGGGCTCAAAATTAATGAATGGTATACCCATATCCGGCAGTTTCA
CGTTCTTGAGGCGGAGCGCGTCAAACGTGAAGTAGAGAGAGAGATCGAGGATATGGAAGAAGATCAGGATCTGCTGCTGT
ATTATTCATTAATGGAATTCAGACACCGTGTCATGCTGGATTACATCAAGCCCTTAAAGGAGGACCCTTCTCAGCCTGAG
TTTTCAGAATTATTGGAAGACATTGAAGGCAACCAGTATAAACTGACAGGACTGCTTGATTACTACTTTAATTTTTTTCG
AGGAATGTACGAATTTAAACAGAAAATGTTCCTAAACGCCATGATGTATTACAAACGGGCTGAAAAAAACCTTGCACTCG
TTTCTGATGACATCGAGAAAGCTGAGTTTGCTTTTAAAATGGCCGAGATATTTTACAACCTGAAACAAACCTACGTCTCC
ATGAGTTATGCCGTTCAAGCCCTTGAAACGTACCAATCGTATGAGACGTACAACGTCCGCAGAATCCAATGTGAATTCGT
TATTGCAGGGAATTATGATGACATGCAGTATCCAGAAAGAGCATTGCCCCACTTAGAACTTGCTTTAGATCTTGCAAAAC
AAGAAGGCAATCCCCGTCTTATCAGTTCAGCCTTATATAATCTCGGAAACTGTTACGAAAAAATGGGAGACCTCTCTAAA
GCAGCCGAATATTTTGAGACATCCGTTTCCATTTGCAGGTCAGAAAAGTTCGATAATCTTCCGCATTCTATTTACTCATT
AACACAGGTTCTTTATAAACAGAACACTACAGCCGAAGCAGAGAAGCAATACCGTCTCGGGCTCAGTATCGCCCGCGAAT
ACAATGATGAATTGTTTGTGAATCTGTTCCAATTTTTACATGCGTTATACGGCAAGGAAATGGATAACGCATCCGTCAGG
CACACGTTTGATTTTCTGGAAGAACACATGCTGTATCCGTATGTGGAAGAATTGGCGCATGATGCTGCCAAATTTTACAT
GAAACACGGACAGCCTGAAAAAGCGCTCACGTTTTATGAAAAAATGGTGCACGCCCAAAAACAAATCCAGAGAGGAGATT
GTCTATATGAAATCTAA
TTGAGGATGAAGCAGACTATTCCGTCCTCTTTTGTCGGGCTCAAAATTAATGAATGGTATACCCATATCCGGCAGTTTCA
CGTTCTTGAGGCGGAGCGCGTCAAACGTGAAGTAGAGAGAGAGATCGAGGATATGGAAGAAGATCAGGATCTGCTGCTGT
ATTATTCATTAATGGAATTCAGACACCGTGTCATGCTGGATTACATCAAGCCCTTAAAGGAGGACCCTTCTCAGCCTGAG
TTTTCAGAATTATTGGAAGACATTGAAGGCAACCAGTATAAACTGACAGGACTGCTTGATTACTACTTTAATTTTTTTCG
AGGAATGTACGAATTTAAACAGAAAATGTTCCTAAACGCCATGATGTATTACAAACGGGCTGAAAAAAACCTTGCACTCG
TTTCTGATGACATCGAGAAAGCTGAGTTTGCTTTTAAAATGGCCGAGATATTTTACAACCTGAAACAAACCTACGTCTCC
ATGAGTTATGCCGTTCAAGCCCTTGAAACGTACCAATCGTATGAGACGTACAACGTCCGCAGAATCCAATGTGAATTCGT
TATTGCAGGGAATTATGATGACATGCAGTATCCAGAAAGAGCATTGCCCCACTTAGAACTTGCTTTAGATCTTGCAAAAC
AAGAAGGCAATCCCCGTCTTATCAGTTCAGCCTTATATAATCTCGGAAACTGTTACGAAAAAATGGGAGACCTCTCTAAA
GCAGCCGAATATTTTGAGACATCCGTTTCCATTTGCAGGTCAGAAAAGTTCGATAATCTTCCGCATTCTATTTACTCATT
AACACAGGTTCTTTATAAACAGAACACTACAGCCGAAGCAGAGAAGCAATACCGTCTCGGGCTCAGTATCGCCCGCGAAT
ACAATGATGAATTGTTTGTGAATCTGTTCCAATTTTTACATGCGTTATACGGCAAGGAAATGGATAACGCATCCGTCAGG
CACACGTTTGATTTTCTGGAAGAACACATGCTGTATCCGTATGTGGAAGAATTGGCGCATGATGCTGCCAAATTTTACAT
GAAACACGGACAGCCTGAAAAAGCGCTCACGTTTTATGAAAAAATGGTGCACGCCCAAAAACAAATCCAGAGAGGAGATT
GTCTATATGAAATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
44.415 |
99.471 |
0.442 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
42.48 |
100 |
0.426 |