Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   GN234_RS20290 Genome accession   NZ_CP048810
Coordinates   4623247..4623672 (+) Length   141 a.a.
NCBI ID   WP_109752380.1    Uniprot ID   -
Organism   Pseudomonas bijieensis strain L22-9     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4618247..4628672
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GN234_RS20260 (GN234_20190) - 4618254..4619258 (-) 1005 WP_003177495.1 aspartate carbamoyltransferase catalytic subunit -
  GN234_RS20265 (GN234_20195) pyrR 4619283..4619789 (-) 507 WP_109752388.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  GN234_RS20270 (GN234_20200) ruvX 4619875..4620312 (-) 438 WP_109752386.1 Holliday junction resolvase RuvX -
  GN234_RS20275 (GN234_20205) - 4620312..4620881 (-) 570 WP_018609528.1 YqgE/AlgH family protein -
  GN234_RS20280 (GN234_20210) - 4621096..4621992 (-) 897 WP_109752384.1 energy transducer TonB -
  GN234_RS20285 (GN234_20215) gshB 4622069..4623022 (-) 954 WP_116833657.1 glutathione synthase -
  GN234_RS20290 (GN234_20220) pilG 4623247..4623672 (+) 426 WP_109752380.1 twitching motility response regulator PilG Regulator
  GN234_RS20295 (GN234_20225) pilH 4623721..4624086 (+) 366 WP_058544375.1 twitching motility response regulator PilH -
  GN234_RS20300 (GN234_20230) - 4624097..4624636 (+) 540 WP_109752378.1 chemotaxis protein CheW -
  GN234_RS20305 (GN234_20235) - 4624848..4626908 (+) 2061 WP_176688970.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 141 a.a.        Molecular weight: 15379.85 Da        Isoelectric Point: 7.4360

>NTDB_id=423164 GN234_RS20290 WP_109752380.1 4623247..4623672(+) (pilG) [Pseudomonas bijieensis strain L22-9]
MAEHLTQQPSALKVMVIDDSKTIRRTAETLLRNVGCEVITAIDGFDALAKIADHHPGIIFVDIMMPRLDGYQTCALIKNN
SAFKATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLGAIQAHVPGFAAVQPHQAH

Nucleotide


Download         Length: 426 bp        

>NTDB_id=423164 GN234_RS20290 WP_109752380.1 4623247..4623672(+) (pilG) [Pseudomonas bijieensis strain L22-9]
ATGGCAGAGCATCTCACGCAGCAACCCAGCGCCTTGAAGGTCATGGTCATCGACGACTCGAAGACCATCCGCCGCACCGC
CGAAACCTTGCTGCGCAACGTGGGCTGCGAGGTGATCACGGCTATCGACGGCTTCGATGCCCTGGCCAAGATCGCCGACC
ATCATCCGGGCATCATTTTTGTCGACATCATGATGCCGCGCCTCGATGGCTACCAGACCTGTGCCCTGATCAAGAACAAC
AGCGCGTTCAAGGCCACGCCGGTGATCATGCTGTCGTCCCGGGACGGGTTGTTCGACAAGGCCAAGGGGCGCATCGTCGG
TTCCGATCAGTTTTTGACCAAGCCGTTCAGCAAGGAAGAACTGCTGGGCGCGATACAGGCCCATGTCCCGGGCTTTGCCG
CTGTCCAGCCGCACCAGGCACATTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(14-125)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.119

83.688

0.645

Multiple sequence alignment