Detailed information NTG0423137

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BAINH2_RS02585
• Genome accession: NZ_CP061852
• Coordinates: 535032..536210 (+)
• Length: 392 a.a.
• NCBI ID: WP_053573663.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain INH2-4b
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 530032..541210

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAINH2_RS02555 (BAINH2_02555)	-	531371..531820 (-)	450	WP_053573666.1	hypothetical protein	-
BAINH2_RS02560 (BAINH2_02560)	-	532418..532576 (+)	159	Protein_467	hypothetical protein	-
BAINH2_RS19630	-	532647..532913 (-)	267	WP_199910799.1	TQO small subunit DoxD	-
BAINH2_RS02570 (BAINH2_02570)	-	533375..533878 (-)	504	WP_004393007.1	Rrf2 family transcriptional regulator	-
BAINH2_RS02575 (BAINH2_02575)	-	534075..534716 (+)	642	WP_053573664.1	FMN-dependent NADH-azoreductase	-
BAINH2_RS02580 (BAINH2_02580)	-	534725..534871 (+)	147	WP_108702392.1	NAD-dependent epimerase/dehydratase family protein	-
BAINH2_RS02585 (BAINH2_02585)	rapC	535032..536210 (+)	1179	WP_053573663.1	RapH N-terminal domain-containing protein	Regulator
BAINH2_RS02590 (BAINH2_02590)	-	536391..537668 (+)	1278	WP_053573662.1	hypothetical protein	-
BAINH2_RS02595 (BAINH2_02595)	-	538130..538285 (+)	156	Protein_474	tetratricopeptide repeat protein	-
BAINH2_RS19635	-	538242..538370 (+)	129	WP_223204396.1	hypothetical protein	-
BAINH2_RS19930	-	538327..538445 (+)	119	Protein_476	IS1595 family transposase	-
BAINH2_RS19640	-	539152..539518 (+)	367	Protein_477	BCCT family transporter	-
BAINH2_RS02605 (BAINH2_02605)	-	539557..540960 (+)	1404	WP_021495073.1	MFS transporter	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 46618.90 Da
• Isoelectric Point: 4.7518

>NTDB_id=423137 BAINH2_RS02585 WP_053573663.1 535032..536210(+) (rapC) [Bacillus amyloliquefaciens strain INH2-4b]
MHRILLDENRKIPYDLVTQKLNDWYTLIKNDQVEQAEHIRKEVEKELVNLEENQDALLYYQLLEFRHEIMLSYMESKRID
DLNSAYETIKEMEEQGQLTGMLEYYFFFFTGMYEFRRKELTTAISAYRIAETKLSEVEDEIEKAEFFFKVSYVYYYMKQT
YFSMNYASRALKIFQKFDEYAVQTLRCQFIVAGNLIDSLEFERALQQFLNALEIAEYTKIPHLIGMSHMNIGICYEELKD
YNNASIHLGLSIDIFEKSKHSFLTKALFAMAHVYAKKHNFDIAYNYFIKGRSEAENRNDKEYIAKFKILEGLYFSNGEYE
LIDEAFSYLADRKMFADMENFATEIGDYFYGEGELELSNKFYRMSIEARRKIKRGEIINEDQPNSIGSNGVE

Nucleotide

• Length: 1179 bp

>NTDB_id=423137 BAINH2_RS02585 WP_053573663.1 535032..536210(+) (rapC) [Bacillus amyloliquefaciens strain INH2-4b]
TTGCACCGGATTCTCTTGGATGAAAACAGAAAAATTCCGTACGACCTAGTCACTCAAAAATTGAATGATTGGTATACTCT
TATTAAAAATGATCAAGTTGAACAGGCTGAGCATATAAGAAAAGAAGTGGAAAAAGAATTAGTGAATCTGGAAGAAAATC
AAGACGCTTTGTTATACTATCAATTGCTTGAATTCCGACACGAGATAATGTTGAGTTATATGGAATCGAAAAGGATTGAT
GATTTAAATAGTGCGTATGAAACAATAAAAGAAATGGAAGAGCAAGGGCAATTAACGGGTATGCTTGAGTATTACTTTTT
CTTTTTTACAGGTATGTACGAGTTCAGACGTAAAGAATTAACAACGGCAATAAGTGCTTATAGGATTGCTGAAACAAAAC
TTTCTGAAGTGGAAGATGAAATAGAAAAAGCTGAGTTTTTTTTCAAAGTTTCATACGTTTATTATTATATGAAACAGACT
TACTTTTCGATGAATTATGCTAGTCGTGCTTTGAAAATATTTCAGAAGTTCGATGAATACGCTGTTCAAACATTGCGCTG
TCAGTTTATAGTAGCAGGAAATTTGATAGATTCTTTGGAATTTGAAAGAGCGTTGCAACAATTTTTGAATGCATTGGAAA
TTGCAGAGTACACCAAAATTCCTCATCTGATTGGTATGTCTCATATGAACATTGGGATTTGTTATGAAGAGTTAAAGGAT
TATAATAATGCTTCTATCCATTTGGGATTGTCGATAGATATTTTTGAAAAATCTAAACATAGTTTTTTGACAAAAGCTTT
GTTTGCTATGGCTCACGTATATGCCAAAAAACATAATTTTGATATAGCTTATAATTATTTCATTAAAGGACGAAGCGAAG
CAGAGAATAGGAATGATAAAGAATACATTGCAAAATTTAAAATTTTAGAAGGACTTTATTTTTCAAATGGTGAATATGAA
TTAATTGATGAAGCATTTTCTTACCTTGCTGACAGAAAAATGTTTGCTGACATGGAGAATTTTGCAACTGAAATAGGCGA
TTATTTTTATGGAGAAGGGGAATTAGAACTTTCAAACAAATTTTATCGTATGAGTATTGAAGCAAGACGAAAAATCAAAA
GAGGGGAGATTATTAATGAAGATCAGCCGAATTCTATTGGGAGTAATGGTGTTGAGTAG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (11-71)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.666	96.173	0.362