Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   BAINH2_RS00215 Genome accession   NZ_CP061852
Coordinates   42651..43478 (+) Length   275 a.a.
NCBI ID   WP_004264723.1    Uniprot ID   A7Z0F5
Organism   Bacillus amyloliquefaciens strain INH2-4b     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 37651..48478
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAINH2_RS00190 (BAINH2_00190) - 38726..40159 (+) 1434 WP_053573814.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  BAINH2_RS00195 (BAINH2_00195) tmk 40156..40794 (+) 639 WP_007409918.1 dTMP kinase -
  BAINH2_RS00200 (BAINH2_00200) darA 40865..41194 (+) 330 WP_004264734.1 cyclic di-AMP receptor DarA -
  BAINH2_RS00205 (BAINH2_00205) - 41207..41647 (+) 441 WP_004264730.1 YaaR family protein -
  BAINH2_RS00210 (BAINH2_00210) holB 41659..42648 (+) 990 WP_007409919.1 DNA polymerase III subunit delta' -
  BAINH2_RS00215 (BAINH2_00215) yaaT 42651..43478 (+) 828 WP_004264723.1 competence/sporulation regulator complex protein RicT Regulator
  BAINH2_RS00220 (BAINH2_00220) yabA 43493..43852 (+) 360 WP_004264720.1 replication initiation-control protein YabA -
  BAINH2_RS00225 (BAINH2_00225) - 43913..44656 (+) 744 WP_004264717.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  BAINH2_RS00230 (BAINH2_00230) - 44643..44942 (+) 300 WP_007409921.1 GIY-YIG nuclease family protein -
  BAINH2_RS00235 (BAINH2_00235) rsmI 44917..45798 (+) 882 WP_053573815.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  BAINH2_RS00240 (BAINH2_00240) abrB 45848..46138 (-) 291 WP_169510469.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31160.93 Da        Isoelectric Point: 4.6504

>NTDB_id=423117 BAINH2_RS00215 WP_004264723.1 42651..43478(+) (yaaT) [Bacillus amyloliquefaciens strain INH2-4b]
MYNVIGVRFKKAGKIYYFDPNGFDIEQDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFEVCQKKVADHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDLGEMITTANGPAKVVGLNI
LERVLQVELKNREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=423117 BAINH2_RS00215 WP_004264723.1 42651..43478(+) (yaaT) [Bacillus amyloliquefaciens strain INH2-4b]
TTGTACAACGTAATAGGCGTCCGCTTTAAAAAAGCGGGGAAAATTTATTATTTTGATCCGAACGGATTTGATATAGAACA
AGACAGCTGCGTCATTGTTGAAACCGTAAGAGGTGTCGAATACGGGCAGGTTGTCATCGCAAATAAACAAGTGGACGAGC
ATGATGTTGTGCTTCCGCTTCGAAAGGTCATACGCGTTGCTGATGAACGCGATCTTCTCATTGTAGAAGAAAACAAACAG
GAGGCCCTGTCCGCTTTTGAAGTCTGTCAGAAAAAAGTGGCTGACCACGGCTTAGATATGAAGCTGGTTGATGTTGAGTT
TACATTTGACCGCAATAAAGTTATTTTTTACTTTACAGCAGACGGACGGGTTGATTTCAGGGAATTGGTCAAAGACTTGG
CTTCTATCTTTAAAACGAGAATCGAATTGCGCCAAATCGGGGTGAGGGACGAGGCGAAAATGCTCGGCGGTATCGGGCCC
TGCGGGAGAATGCTTTGCTGCTCCACGTTCCTCGGTGATTTTGAACCGGTGTCCATCAAAATGGCGAAGGATCAAAATTT
ATCGTTGAACCCAACGAAGATTTCCGGTCTGTGCGGCCGTTTGATGTGCTGTTTGAAGTACGAAAATGATGAGTATGAGA
CGGCAAAAGAACAGCTGCCGGATTTAGGCGAAATGATTACGACGGCAAACGGCCCCGCAAAGGTTGTCGGTCTTAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGAAGAATCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z0F5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

96.727

100

0.967