Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   G3T50_RS06710 Genome accession   NZ_CP048771
Coordinates   1286181..1287149 (+) Length   322 a.a.
NCBI ID   WP_167842904.1    Uniprot ID   -
Organism   Campylobacter jejuni strain ZS007     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1281181..1292149
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G3T50_RS06685 (G3T50_06660) cdsA 1282091..1282816 (-) 726 WP_052782285.1 phosphatidate cytidylyltransferase -
  G3T50_RS06690 (G3T50_06665) - 1282825..1283163 (-) 339 WP_002852397.1 hypothetical protein -
  G3T50_RS06695 (G3T50_06670) - 1283165..1284472 (-) 1308 WP_167842902.1 NFACT family protein -
  G3T50_RS06700 (G3T50_06675) mobA 1284534..1285109 (+) 576 WP_002858185.1 molybdenum cofactor guanylyltransferase -
  G3T50_RS06705 (G3T50_06680) pldA 1285106..1286095 (+) 990 WP_167842903.1 phospholipase A -
  G3T50_RS06710 (G3T50_06685) ceuB 1286181..1287149 (+) 969 WP_167842904.1 ABC transporter permease Machinery gene
  G3T50_RS06715 (G3T50_06690) ceuC 1287142..1288080 (+) 939 WP_002867309.1 iron chelate uptake ABC transporter family permease subunit -
  G3T50_RS06720 (G3T50_06695) ceuD 1288077..1288832 (+) 756 WP_167842905.1 ABC transporter ATP-binding protein -
  G3T50_RS06725 (G3T50_06700) ceuB 1288845..1289837 (+) 993 WP_044306199.1 enterochelin ABC transporter substrate-binding protein CeuB -
  G3T50_RS06735 (G3T50_06710) - 1290063..1290617 (-) 555 WP_126212341.1 hypothetical protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35425.39 Da        Isoelectric Point: 9.7997

>NTDB_id=422867 G3T50_RS06710 WP_167842904.1 1286181..1287149(+) (ceuB) [Campylobacter jejuni strain ZS007]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILKLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILVSLIFFAGASFFTQAIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=422867 G3T50_RS06710 WP_167842904.1 1286181..1287149(+) (ceuB) [Campylobacter jejuni strain ZS007]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAAACTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGGACCATGGATTGTGCTAAATTTGGTATACTTGTTTCTTTGATATTTTTTGCTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTGTATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTAATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTTATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.068

100

0.991

Multiple sequence alignment