Detailed information NTG0422836

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: G3R55_RS05415
• Genome accession: NZ_CP048769
• Coordinates: 1040494..1041438 (+)
• Length: 314 a.a.
• NCBI ID: WP_167861736.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain ZJB020
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1035494..1046438

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G3R55_RS05390 (G3R55_05385)	-	1035505..1036704 (-)	1200	WP_139849862.1	glycosyltransferase family 8 protein	-
G3R55_RS05395 (G3R55_05390)	-	1036833..1038149 (+)	1317	WP_052780247.1	hypothetical protein	-
G3R55_RS05400 (G3R55_05395)	-	1038133..1039182 (+)	1050	WP_139849864.1	asparagine synthase C-terminal domain-containing protein	-
G3R55_RS05405 (G3R55_05400)	-	1039185..1039601 (+)	417	WP_002791229.1	adenylyltransferase/cytidyltransferase family protein	-
G3R55_RS05410 (G3R55_05405)	waaV	1039620..1040435 (-)	816	WP_167861735.1	glycosyltransferase family 2 protein	-
G3R55_RS05415 (G3R55_05410)	waaF	1040494..1041438 (+)	945	WP_167861736.1	lipopolysaccharide heptosyltransferase II	Regulator
G3R55_RS05420 (G3R55_05415)	-	1041421..1042875 (-)	1455	WP_167861737.1	hypothetical protein	-
G3R55_RS05425 (G3R55_05420)	gmhA	1042887..1043447 (-)	561	WP_167861738.1	D-sedoheptulose 7-phosphate isomerase	-
G3R55_RS05430 (G3R55_05425)	rfaE1	1043444..1044829 (-)	1386	WP_167861739.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
G3R55_RS05435 (G3R55_05430)	rfaD	1044822..1045775 (-)	954	WP_052806073.1	ADP-glyceromanno-heptose 6-epimerase	-
G3R55_RS05440 (G3R55_05435)	gmhB	1045776..1046337 (-)	562	Protein_1060	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-

Sequence

Protein

• Length: 314 a.a.
• Molecular weight: 36141.80 Da
• Isoelectric Point: 10.3414

>NTDB_id=422836 G3R55_RS05415 WP_167861736.1 1040494..1041438(+) (waaF) [Campylobacter jejuni strain ZJB020]
MKIFIHLPTWLGDAVMASPALYTIKEHFKDAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLGIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNKNAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEMVIKKLKFDI

Nucleotide

• Length: 945 bp

>NTDB_id=422836 G3R55_RS05415 WP_167861736.1 1040494..1041438(+) (waaF) [Campylobacter jejuni strain ZJB020]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCCCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGTTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATCACAAACGACAGT
GGTCCTATGCACCTAAGTGCAGTTTATAAGGTAAAAACCGTGGCTATTTTTGGTCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATAAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAATGGTTATAAAAAAATTAAAATTTGACATTTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	96.463	99.045	0.955