Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   G3T45_RS07130 Genome accession   NZ_CP048764
Coordinates   1364801..1365982 (-) Length   393 a.a.
NCBI ID   WP_167843225.1    Uniprot ID   -
Organism   Campylobacter jejuni strain ZH003     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1359801..1370982
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G3T45_RS07105 (G3T45_07100) fliL 1360939..1361475 (+) 537 WP_002779164.1 flagellar basal body-associated protein FliL -
  G3T45_RS07110 (G3T45_07105) acpS 1361475..1361822 (+) 348 WP_002779165.1 holo-ACP synthase -
  G3T45_RS07115 (G3T45_07110) - 1361825..1362247 (-) 423 WP_002779166.1 hypothetical protein -
  G3T45_RS07120 (G3T45_07115) - 1362244..1363614 (-) 1371 WP_002783822.1 cytochrome P450 -
  G3T45_RS07125 (G3T45_07120) - 1363611..1364732 (-) 1122 WP_139850246.1 DUF829 domain-containing protein -
  G3T45_RS07130 (G3T45_07125) kpsS 1364801..1365982 (-) 1182 WP_167843225.1 capsule biosynthesis protein Regulator
  G3T45_RS07135 (G3T45_07130) - 1365979..1368006 (-) 2028 WP_167843226.1 capsular polysaccharide biosynthesis protein -
  G3T45_RS07140 (G3T45_07135) - 1368062..1369507 (+) 1446 WP_052774155.1 DNA/RNA helicase domain-containing protein -
  G3T45_RS07145 (G3T45_07140) - 1369500..1370171 (-) 672 WP_052774154.1 nucleotidyltransferase family protein -
  G3T45_RS07150 (G3T45_07145) - 1370159..1370764 (-) 606 WP_052774153.1 D-sedoheptulose 7-phosphate isomerase -

Sequence


Protein


Download         Length: 393 a.a.        Molecular weight: 46504.26 Da        Isoelectric Point: 9.9895

>NTDB_id=422762 G3T45_RS07130 WP_167843225.1 1364801..1365982(-) (kpsS) [Campylobacter jejuni strain ZH003]
MKFRDKIKKEFSGKTVLLLQGPVGTFFHRLAIKMKKNKTKVFKLNFNGGDFLFYPSGKRCKCDEKDLENFYESFFKEKKI
DAIVMYNDCRLIHAKAIKVAKELGIGIWIFEEGYLRPYCITFEKDGVNANSSLPRDKNFYLSCNILTKESIKEIPGGFKF
MAFSTFLYWLFSFLLAPFFNNKLHHRTLFPFEFLFWFRSLYRKYLYKLTEKKLNQKIYSLEKKYFLAILQVYNDTQIKHH
YKKSIEEFIEELILSFANHARAKSYLIFKHHPMDRGYRNYSKLINELSQKYHVEGRIFYVHDTYLPTLLKNALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLAYPKKLQFFWREAHAYKPNPSLVINFKNYLLNTNQFNGNFYKNSFLG

Nucleotide


Download         Length: 1182 bp        

>NTDB_id=422762 G3T45_RS07130 WP_167843225.1 1364801..1365982(-) (kpsS) [Campylobacter jejuni strain ZH003]
ATGAAATTTAGAGATAAGATTAAAAAAGAATTTAGCGGTAAAACTGTCTTGCTTTTACAAGGACCTGTAGGCACTTTTTT
TCACCGCCTTGCTATAAAGATGAAAAAAAATAAAACCAAAGTTTTTAAGCTTAATTTTAATGGAGGGGATTTTCTTTTCT
ATCCAAGTGGAAAAAGGTGCAAGTGCGACGAAAAGGATCTTGAAAATTTTTATGAGAGCTTTTTTAAAGAAAAAAAGATA
GATGCTATTGTGATGTATAATGATTGCCGTTTGATCCATGCAAAAGCTATCAAAGTAGCTAAGGAGCTTGGCATTGGTAT
TTGGATTTTTGAAGAGGGGTATTTAAGGCCTTATTGTATCACTTTTGAAAAAGATGGGGTCAATGCAAACTCCTCCTTGC
CTCGCGATAAAAATTTCTATCTTTCTTGCAATATCCTTACAAAAGAAAGCATAAAAGAAATTCCAGGTGGTTTTAAATTT
ATGGCCTTTAGTACTTTTCTGTATTGGCTTTTTTCTTTTCTGCTAGCTCCTTTTTTTAACAACAAGCTTCATCATCGCAC
CTTATTTCCTTTTGAATTTTTATTTTGGTTTAGATCTTTATATAGAAAATATCTTTATAAACTCACAGAAAAAAAACTCA
ATCAAAAAATTTATAGCCTTGAAAAAAAGTACTTTTTGGCTATTTTGCAAGTTTATAATGATACGCAAATTAAGCACCAT
TATAAAAAAAGCATAGAAGAATTTATAGAAGAGCTTATCCTTTCTTTTGCAAATCACGCAAGAGCAAAGTCTTATCTTAT
CTTTAAACATCATCCTATGGATAGGGGATATAGAAATTATTCTAAACTTATAAATGAGCTAAGTCAAAAATACCATGTAG
AAGGAAGAATTTTCTATGTACATGATACTTATTTGCCTACTCTTTTAAAAAATGCTTTAGGTTGTATTACGATCAATTCT
ACAGTAGGTTTAAGTGCTATTTTAGAGGGTTGTCCTACTAAGGTTTGTGGAAATGCTTTTTATGATTTTGAAGGCCTAGC
TTATCCAAAAAAACTTCAATTTTTTTGGCGCGAAGCTCATGCTTATAAACCCAATCCTAGCTTGGTTATAAATTTTAAAA
ATTATCTTTTAAATACAAATCAGTTCAATGGCAATTTTTACAAAAATTCGTTTTTAGGTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

86.99

99.746

0.868


Multiple sequence alignment