Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   G3T45_RS03500 Genome accession   NZ_CP048764
Coordinates   656546..656983 (+) Length   145 a.a.
NCBI ID   WP_002852324.1    Uniprot ID   A0AA44HIV8
Organism   Campylobacter jejuni strain ZH003     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 651546..661983
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G3T45_RS08825 - 652033..652626 (+) 594 WP_251823406.1 hypothetical protein -
  G3T45_RS03480 (G3T45_03495) - 652613..653965 (+) 1353 WP_251823407.1 DUF4118 domain-containing protein -
  G3T45_RS03485 (G3T45_03500) uvrB 653960..655933 (-) 1974 WP_167843434.1 excinuclease ABC subunit UvrB -
  G3T45_RS03490 (G3T45_03505) - 656087..656317 (+) 231 WP_002852327.1 hypothetical protein -
  G3T45_RS03495 (G3T45_03510) - 656307..656549 (+) 243 WP_002854947.1 hypothetical protein -
  G3T45_RS03500 (G3T45_03515) Cj0683 656546..656983 (+) 438 WP_002852324.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  G3T45_RS03505 (G3T45_03520) priA 656965..658818 (+) 1854 WP_002888182.1 primosomal protein N' -
  G3T45_RS03510 (G3T45_03525) - 658828..659502 (-) 675 Protein_681 DUF2972 domain-containing protein -
  G3T45_RS03515 (G3T45_03530) istB 659718..660476 (+) 759 WP_032491274.1 IS21-like element helper ATPase IstB -
  G3T45_RS03520 (G3T45_03535) - 660598..660999 (+) 402 WP_060785229.1 pyridoxamine 5'-phosphate oxidase family protein -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16765.76 Da        Isoelectric Point: 8.0993

>NTDB_id=422751 G3T45_RS03500 WP_002852324.1 656546..656983(+) (Cj0683) [Campylobacter jejuni strain ZH003]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI

Nucleotide


Download         Length: 438 bp        

>NTDB_id=422751 G3T45_RS03500 WP_002852324.1 656546..656983(+) (Cj0683) [Campylobacter jejuni strain ZH003]
ATGAACAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTGTCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCGCAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAATGCCAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-23)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

100

100

1

Multiple sequence alignment