Detailed information
Bioinformatically predicted
Overview
| Name | waaF | Type | Regulator |
| Locus tag | G3T47_RS05830 | Genome accession | NZ_CP048761 |
| Coordinates | 1107354..1108313 (+) | Length | 319 a.a. |
| NCBI ID | WP_167844443.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain ZS004 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1102354..1113313
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G3T47_RS05805 (G3T47_05800) | neuB | 1102856..1103896 (+) | 1041 | WP_167844438.1 | N-acetylneuraminate synthase | - |
| G3T47_RS05810 (G3T47_05805) | neuC | 1103893..1105011 (+) | 1119 | WP_167844439.1 | UDP-N-acetylglucosamine 2-epimerase | - |
| G3T47_RS05815 (G3T47_05810) | - | 1105008..1105673 (+) | 666 | WP_167844440.1 | acylneuraminate cytidylyltransferase family protein | - |
| G3T47_RS05820 (G3T47_05815) | - | 1105661..1106491 (+) | 831 | WP_167844441.1 | CatB-related O-acetyltransferase | - |
| G3T47_RS05825 (G3T47_05820) | waaV | 1106483..1107295 (-) | 813 | WP_167844442.1 | glycosyltransferase family 2 protein | - |
| G3T47_RS05830 (G3T47_05825) | waaF | 1107354..1108313 (+) | 960 | WP_167844443.1 | glycosyltransferase family 9 protein | Regulator |
| G3T47_RS05835 (G3T47_05830) | gmhA | 1108294..1108854 (-) | 561 | WP_087695966.1 | D-sedoheptulose 7-phosphate isomerase | - |
| G3T47_RS05840 (G3T47_05835) | rfaE1 | 1108851..1110236 (-) | 1386 | WP_167844444.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| G3T47_RS05845 (G3T47_05840) | rfaD | 1110229..1111182 (-) | 954 | WP_167844445.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| G3T47_RS05850 (G3T47_05845) | gmhB | 1111183..1111743 (-) | 561 | WP_002878815.1 | D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase | - |
| G3T47_RS05855 (G3T47_05850) | - | 1111825..1112127 (+) | 303 | WP_002852762.1 | cytochrome c | - |
| G3T47_RS05860 (G3T47_05855) | ccoS | 1112150..1112356 (-) | 207 | WP_002852798.1 | cbb3-type cytochrome oxidase assembly protein CcoS | - |
Sequence
Protein
Download Length: 319 a.a. Molecular weight: 36868.46 Da Isoelectric Point: 10.3850
>NTDB_id=422701 G3T47_RS05830 WP_167844443.1 1107354..1108313(+) (waaF) [Campylobacter jejuni strain ZS004]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFREFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVVIFGPTKFTQTSPWQNQNARWVHLDLACMPCMQKICPLKHHKCMKDLKPQRVIEEARNLLKNPHL
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFREFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVVIFGPTKFTQTSPWQNQNARWVHLDLACMPCMQKICPLKHHKCMKDLKPQRVIEEARNLLKNPHL
Nucleotide
Download Length: 960 bp
>NTDB_id=422701 G3T47_RS05830 WP_167844443.1 1107354..1108313(+) (waaF) [Campylobacter jejuni strain ZS004]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCAGTAATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAGGGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAGCAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATCACAAACGACAGT
GGTCCTATGCACCTAAGTGCAGTTTATAAGGTAAAAACCGTAGTTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAATGCAAGATGGGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCAGTAATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAGGGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAGCAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATCACAAACGACAGT
GGTCCTATGCACCTAAGTGCAGTTTATAAGGTAAAAACCGTAGTTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAATGCAAGATGGGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| waaF | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
93.417 |
100 |
0.934 |