Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | G3T47_RS05495 | Genome accession | NZ_CP048761 |
| Coordinates | 1041089..1041391 (+) | Length | 100 a.a. |
| NCBI ID | WP_002936694.1 | Uniprot ID | A0A5T1QQE6 |
| Organism | Campylobacter jejuni strain ZS004 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1036089..1046391
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G3T47_RS05470 (G3T47_05465) | rpsR | 1036451..1036711 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| G3T47_RS05475 (G3T47_05470) | lon | 1036772..1039147 (-) | 2376 | WP_167844420.1 | endopeptidase La | - |
| G3T47_RS05480 (G3T47_05475) | - | 1039164..1039811 (-) | 648 | WP_167844421.1 | outer membrane protein assembly factor BamD | - |
| G3T47_RS05485 (G3T47_05480) | fliW | 1039972..1040361 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| G3T47_RS05490 (G3T47_05485) | proC | 1040361..1041092 (+) | 732 | WP_002880800.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| G3T47_RS05495 (G3T47_05490) | ctsT | 1041089..1041391 (+) | 303 | WP_002936694.1 | type II secretion system protein | Machinery gene |
| G3T47_RS05500 (G3T47_05495) | - | 1041388..1042050 (+) | 663 | WP_167844422.1 | hypothetical protein | - |
| G3T47_RS05505 (G3T47_05500) | - | 1042047..1042499 (+) | 453 | WP_002870542.1 | hypothetical protein | - |
| G3T47_RS05510 (G3T47_05505) | hemD | 1042496..1043125 (-) | 630 | WP_167844423.1 | uroporphyrinogen-III synthase | - |
| G3T47_RS05515 (G3T47_05510) | thiE | 1043103..1043735 (-) | 633 | WP_167844424.1 | thiamine phosphate synthase | - |
| G3T47_RS05520 (G3T47_05515) | thiD | 1043725..1044537 (-) | 813 | WP_052781897.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| G3T47_RS05525 (G3T47_05520) | - | 1044534..1045220 (-) | 687 | WP_167844425.1 | endonuclease III domain-containing protein | - |
| G3T47_RS05530 (G3T47_05525) | - | 1045217..1045978 (-) | 762 | WP_002867190.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12116.19 Da Isoelectric Point: 6.2957
>NTDB_id=422699 G3T47_RS05495 WP_002936694.1 1041089..1041391(+) (ctsT) [Campylobacter jejuni strain ZS004]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYLQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYLQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=422699 G3T47_RS05495 WP_002936694.1 1041089..1041391(+) (ctsT) [Campylobacter jejuni strain ZS004]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACCTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACCTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACCTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACCTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |