Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   G3T48_RS06820 Genome accession   NZ_CP048760
Coordinates   1305365..1306333 (+) Length   322 a.a.
NCBI ID   WP_052782282.1    Uniprot ID   -
Organism   Campylobacter jejuni strain ZS005     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1300365..1311333
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G3T48_RS06795 (G3T48_06795) cdsA 1301275..1302000 (-) 726 WP_167840724.1 phosphatidate cytidylyltransferase -
  G3T48_RS06800 (G3T48_06800) - 1302009..1302347 (-) 339 WP_002852397.1 hypothetical protein -
  G3T48_RS06805 (G3T48_06805) - 1302349..1303656 (-) 1308 WP_167840725.1 NFACT family protein -
  G3T48_RS06810 (G3T48_06810) mobA 1303718..1304293 (+) 576 WP_002858185.1 molybdenum cofactor guanylyltransferase -
  G3T48_RS06815 (G3T48_06815) pldA 1304290..1305279 (+) 990 WP_167840726.1 phospholipase A -
  G3T48_RS06820 (G3T48_06820) ceuB 1305365..1306333 (+) 969 WP_052782282.1 ABC transporter permease Machinery gene
  G3T48_RS06825 (G3T48_06825) ceuC 1306326..1307264 (+) 939 WP_167840727.1 iron chelate uptake ABC transporter family permease subunit -
  G3T48_RS06830 (G3T48_06830) ceuD 1307261..1308016 (+) 756 WP_002871403.1 ABC transporter ATP-binding protein -
  G3T48_RS06835 (G3T48_06835) ceuB 1308029..1309021 (+) 993 WP_044306199.1 enterochelin ABC transporter substrate-binding protein CeuB -
  G3T48_RS06845 (G3T48_06845) - 1309247..1309801 (-) 555 WP_002867306.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35377.30 Da        Isoelectric Point: 9.7119

>NTDB_id=422679 G3T48_RS06820 WP_052782282.1 1305365..1306333(+) (ceuB) [Campylobacter jejuni strain ZS005]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISSNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLICDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=422679 G3T48_RS06820 WP_052782282.1 1305365..1306333(+) (ceuB) [Campylobacter jejuni strain ZS005]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGGACCATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGTGAAGATA
TAGCTTTAAATCTTGGAATTTCTTCTAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGACTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTCATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTATTTGCGATATCATTTCAAGACTTGTTATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

98.758

100

0.988

Multiple sequence alignment