Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ENTAS_RS07490 Genome accession   NC_015968
Coordinates   1605355..1605981 (+) Length   208 a.a.
NCBI ID   WP_014069628.1    Uniprot ID   -
Organism   Enterobacter soli     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1600355..1610981
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ENTAS_RS07470 (Entas_1460) - 1600752..1602512 (-) 1761 WP_014069624.1 Lon protease family protein -
  ENTAS_RS07475 (Entas_1461) matP 1602699..1603151 (+) 453 WP_014069625.1 macrodomain Ter protein MatP -
  ENTAS_RS07480 (Entas_1462) ompA 1603217..1604272 (-) 1056 WP_014069626.1 porin OmpA -
  ENTAS_RS07485 (Entas_1463) sulA 1604628..1605137 (-) 510 WP_041162028.1 SOS-induced cell division inhibitor SulA -
  ENTAS_RS07490 (Entas_1464) sxy/tfoX 1605355..1605981 (+) 627 WP_014069628.1 TfoX/Sxy family DNA transformation protein Regulator
  ENTAS_RS07495 (Entas_1465) yccS 1605938..1608100 (-) 2163 WP_014069629.1 YccS family putative transporter -
  ENTAS_RS07500 (Entas_1466) - 1608120..1608566 (-) 447 WP_014069630.1 YccF domain-containing protein -
  ENTAS_RS07505 (Entas_1467) helD 1608690..1610744 (+) 2055 WP_014069631.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23965.42 Da        Isoelectric Point: 6.8774

>NTDB_id=42266 ENTAS_RS07490 WP_014069628.1 1605355..1605981(+) (sxy/tfoX) [Enterobacter soli]
MKKISYERIYQSQEYLSELGDIHHRALFGGYTLAVDNAVFAMVSDGELYLRACEQSATYYVKHASSFLTLLKRGRPVLLN
YFRVDDGLWQDRGTLLQLSSFALEAARRERYQRYQRNRLKDLPNLTFQIEVLLFEVGITNEEMLRELGAKASWLKIRAQN
KQLGIKVLFALEGAIEGLHEAALPAEIRQELTEWFNALPESAENRSAM

Nucleotide


Download         Length: 627 bp        

>NTDB_id=42266 ENTAS_RS07490 WP_014069628.1 1605355..1605981(+) (sxy/tfoX) [Enterobacter soli]
ATGAAAAAGATATCTTATGAACGGATTTATCAATCTCAAGAATACCTTTCGGAACTGGGTGATATTCATCACCGCGCGCT
ATTTGGTGGTTATACCCTGGCGGTGGATAACGCCGTTTTTGCCATGGTGTCTGATGGGGAGCTTTATCTGCGTGCCTGTG
AGCAAAGCGCGACCTACTATGTGAAACACGCCTCCTCTTTCTTGACCCTTCTGAAGCGGGGTCGGCCTGTGCTGCTTAAC
TACTTCCGGGTTGATGACGGACTGTGGCAGGACAGGGGGACATTACTCCAGCTTTCTTCTTTTGCGCTTGAGGCCGCCAG
GCGGGAGCGATATCAGCGGTATCAGCGCAACCGGCTTAAAGACCTGCCCAATCTCACCTTCCAGATTGAGGTTCTGCTTT
TTGAAGTCGGGATCACTAACGAAGAAATGTTACGGGAGCTGGGGGCAAAAGCGAGCTGGCTGAAAATCAGGGCGCAAAAC
AAACAACTCGGGATTAAAGTGCTCTTTGCGCTTGAGGGGGCAATAGAAGGGTTGCATGAAGCGGCGCTCCCGGCGGAAAT
TCGCCAGGAGCTTACGGAATGGTTTAACGCGTTGCCAGAGTCTGCGGAGAATCGTTCCGCCATGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

57.635

97.596

0.562

Multiple sequence alignment