Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   G3T49_RS03020 Genome accession   NZ_CP048756
Coordinates   592482..593450 (+) Length   322 a.a.
NCBI ID   WP_057096248.1    Uniprot ID   -
Organism   Campylobacter jejuni strain ZS006     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 587482..598450
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G3T49_RS02995 (G3T49_02980) cdsA 588392..589117 (-) 726 WP_002869324.1 phosphatidate cytidylyltransferase -
  G3T49_RS03000 (G3T49_02985) - 589126..589464 (-) 339 WP_002852397.1 hypothetical protein -
  G3T49_RS03005 (G3T49_02990) - 589466..590773 (-) 1308 WP_167843211.1 NFACT family protein -
  G3T49_RS03010 (G3T49_02995) mobA 590835..591410 (+) 576 WP_002858185.1 molybdenum cofactor guanylyltransferase -
  G3T49_RS03015 (G3T49_03000) pldA 591407..592396 (+) 990 WP_167843212.1 phospholipase A -
  G3T49_RS03020 (G3T49_03005) ceuB 592482..593450 (+) 969 WP_057096248.1 ABC transporter permease Machinery gene
  G3T49_RS03025 (G3T49_03010) ceuC 593443..594381 (+) 939 WP_057096249.1 iron chelate uptake ABC transporter family permease subunit -
  G3T49_RS03030 (G3T49_03015) ceuD 594378..595133 (+) 756 WP_002871403.1 ABC transporter ATP-binding protein -
  G3T49_RS03035 (G3T49_03020) ceuB 595146..596138 (+) 993 WP_053869878.1 enterochelin ABC transporter substrate-binding protein CeuB -
  G3T49_RS03045 (G3T49_03030) - 596364..596918 (-) 555 WP_052794237.1 hypothetical protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35453.40 Da        Isoelectric Point: 9.6678

>NTDB_id=422643 G3T49_RS03020 WP_057096248.1 592482..593450(+) (ceuB) [Campylobacter jejuni strain ZS006]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLICDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=422643 G3T49_RS03020 WP_057096248.1 592482..593450(+) (ceuB) [Campylobacter jejuni strain ZS006]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTTTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGGACCATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATTACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGTTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGACTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTCATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTATTTGCGATATCATTTCAAGACTTGTTATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.068

100

0.991

Multiple sequence alignment