Detailed information NTG0422639

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: G3T49_RS02060
• Genome accession: NZ_CP048756
• Coordinates: 399067..400026 (+)
• Length: 319 a.a.
• NCBI ID: WP_167843154.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain ZS006
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 394067..405026

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G3T49_RS02030	-	394549..394962 (-)	414	WP_167843150.1	hypothetical protein	-
G3T49_RS02035 (G3T49_02020)	-	395030..396016 (-)	987	WP_167843151.1	sulfatase-like hydrolase/transferase	-
G3T49_RS02040 (G3T49_02025)	-	396021..396209 (-)	189	WP_032682936.1	sulfatase-like hydrolase/transferase	-
G3T49_RS02045	-	396219..396920 (-)	702	WP_167843152.1	hypothetical protein	-
G3T49_RS02050 (G3T49_02035)	-	397051..398178 (-)	1128	WP_002835154.1	polysaccharide pyruvyl transferase family protein	-
G3T49_RS02055 (G3T49_02040)	waaV	398190..399008 (-)	819	WP_167843153.1	glycosyltransferase family 2 protein	-
G3T49_RS02060 (G3T49_02045)	waaF	399067..400026 (+)	960	WP_167843154.1	lipopolysaccharide heptosyltransferase II	Regulator
G3T49_RS02065 (G3T49_02050)	gmhA	400007..400567 (-)	561	WP_167843155.1	D-sedoheptulose 7-phosphate isomerase	-
G3T49_RS02070 (G3T49_02055)	rfaE1	400564..401949 (-)	1386	WP_167843156.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
G3T49_RS02075 (G3T49_02060)	rfaD	401942..402895 (-)	954	WP_167843157.1	ADP-glyceromanno-heptose 6-epimerase	-
G3T49_RS02080 (G3T49_02065)	gmhB	402896..403456 (-)	561	WP_002878815.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
G3T49_RS02085 (G3T49_02070)	-	403538..403840 (+)	303	WP_002852762.1	cytochrome c	-
G3T49_RS02090 (G3T49_02075)	ccoS	403863..404069 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36758.33 Da
• Isoelectric Point: 10.3205

>NTDB_id=422639 G3T49_RS02060 WP_167843154.1 399067..400026(+) (waaF) [Campylobacter jejuni strain ZS006]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKVEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLTCMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=422639 G3T49_RS02060 WP_167843154.1 399067..400026(+) (waaF) [Campylobacter jejuni strain ZS006]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGGTCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACGAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGTCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCCTTTTGTGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACAAAATTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTGCATTTAGATCTAACTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.671	100	0.947