Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   G0034_RS07670 Genome accession   NZ_CP048736
Coordinates   1637114..1637740 (+) Length   208 a.a.
NCBI ID   WP_179120687.1    Uniprot ID   -
Organism   Enterobacter sp. T2     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1632114..1642740
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G0034_RS07650 (G0034_07650) - 1632512..1634272 (-) 1761 WP_014883250.1 Lon protease family protein -
  G0034_RS07655 (G0034_07655) matP 1634459..1634911 (+) 453 WP_179120686.1 macrodomain Ter protein MatP -
  G0034_RS07660 (G0034_07660) ompA 1634976..1636031 (-) 1056 WP_014883252.1 porin OmpA -
  G0034_RS07665 (G0034_07665) sulA 1636387..1636896 (-) 510 WP_014883253.1 SOS-induced cell division inhibitor SulA -
  G0034_RS07670 (G0034_07670) sxy/tfoX 1637114..1637740 (+) 627 WP_179120687.1 TfoX/Sxy family DNA transformation protein Regulator
  G0034_RS07675 (G0034_07675) yccS 1637697..1639859 (-) 2163 WP_179120688.1 YccS family putative transporter -
  G0034_RS07680 (G0034_07680) - 1639879..1640325 (-) 447 WP_014883256.1 YccF domain-containing protein -
  G0034_RS07685 (G0034_07685) helD 1640449..1642503 (+) 2055 WP_179120689.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23958.54 Da        Isoelectric Point: 9.0741

>NTDB_id=422592 G0034_RS07670 WP_179120687.1 1637114..1637740(+) (sxy/tfoX) [Enterobacter sp. T2]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAIDDAVFAMVSDGELYLRACEESAKYCVKNAASFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALNAARKERCQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARECWLKMRAKN
RALGIRVLFALEGAIEGLHEAALPAGTRRELTEWFNALPEPQKNHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=422592 G0034_RS07670 WP_179120687.1 1637114..1637740(+) (sxy/tfoX) [Enterobacter sp. T2]
ATGAAAAAGATATCTTATGAACGGATTTATCAATCCCAGGAATACCTCTCACCGCTAGGAGAAATTCATCATCGCGCACT
GTTCGGTGGCTATACCCTGGCGATAGATGACGCGGTTTTTGCCATGGTGTCAGATGGCGAGCTGTACCTTCGCGCCTGTG
AAGAAAGCGCGAAATACTGTGTAAAAAATGCCGCCTCTTTTTTGACGTTAATGAAACGAGGCCGCCCGGTACTTCTCAAC
TATTACCGTGTCGATGATGGACTGTGGCAAGACAGGGAACGGCTGCTTCAGCTCTCCTCTTTCGCGCTCAATGCGGCGAG
GAAAGAGCGCTGTCAGCGCCATCAACGAAACCGGCTTAAAGATCTGCCAAACCTGACCTTTCAGCTTGAGGTATTACTTT
TTGAAGCTGGCATTACTAACGAAGAGACGCTGCGGGCACTGGGTGCCAGGGAGTGCTGGTTAAAGATGCGGGCTAAAAAT
AGGGCACTCGGTATTAGAGTGCTCTTCGCCCTTGAGGGGGCTATTGAGGGTTTGCATGAGGCGGCACTCCCGGCAGGCAC
TCGCCGGGAGTTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGAAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

56.65

97.596

0.553

Multiple sequence alignment