Detailed information NTG0422524

Bioinformatically predicted

Overview

• Name: ccrA
• Type: Machinery gene
• Locus tag: G3G87_RS00275
• Genome accession: NZ_CP048714
• Coordinates: 57201..58550 (-)
• Length: 449 a.a.
• NCBI ID: WP_228865417.1
• Uniprot ID: A0A4Y5MXM0
• Organism: Staphylococcus lugdunensis strain CGMH-SL36
• Function: promote SCCmec transfer (predicted from homology) Homologous recombination

Genomic Context

Location: 52201..63550

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G3G87_RS00250	-	52530..53312 (-)	783	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	-
G3G87_RS00255	-	53463..53840 (-)	378	WP_000361059.1	DUF6262 family protein	-
G3G87_RS00260	-	53847..55739 (-)	1893	WP_001557544.1	site-specific integrase	-
G3G87_RS00265	-	55736..56821 (-)	1086	WP_000868132.1	tyrosine-type recombinase/integrase	-
G3G87_RS00270	-	56961..57179 (-)	219	Protein_51	recombinase family protein	-
G3G87_RS00275	ccrA	57201..58550 (-)	1350	WP_228865417.1	cassette chromosome recombinase CcrA	Machinery gene
G3G87_RS00280	cch1	58784..60577 (-)	1794	WP_228865422.1	cassette chromosome replicative helicase	-
G3G87_RS00285	ssb	60577..60873 (-)	297	WP_000273823.1	cassette chromosome ssDNA-binding protein	-
G3G87_RS00290	-	61066..62112 (-)	1047	WP_001042023.1	hypothetical protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 52619.21 Da
• Isoelectric Point: 9.9639

>NTDB_id=422524 G3G87_RS00275 WP_228865417.1 57201..58550(-) (ccrA) [Staphylococcus lugdunensis strain CGMH-SL36]
MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQMTQLIQQGQCDILCCYRLNRLHRN
LKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRFKLNIFISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYH
NGAFIINQNESPTVKAVFNYYIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
YEQAQRLRSQKQIKQTSSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASRFVCDFKGINAQTLEDKVLEV
CRDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHTLTQEQLIEKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQ
NIIQKRFTLNILYPYIETIHITKDKNLIGIYFKNEPLNIVNQTMQSSIA

Nucleotide

• Length: 1350 bp

>NTDB_id=422524 G3G87_RS00275 WP_228865417.1 57201..58550(-) (ccrA) [Staphylococcus lugdunensis strain CGMH-SL36]
ATGAAACAAGTCATAGGCTATTTACGTCAAAGTACGATGAAACAACAATCTCTTGCAGCACAGAAACAGGCTATCGAAGC
AATAGCCGAAAAACATCATATTCAACATATCAACTTTTATAGCGACAAACAATCAGGACGCAAAGATAATCGTAGTGGGT
ATCGACAAATGACGCAATTAATTCAACAAGGGCAATGTGACATATTATGTTGTTATCGTCTTAATAGATTACATCGTAAT
CTGAAAAATGCATTAAAACTCATCAAATTATGTCAAACATACCATGTTCATATCTTAAGCGTACACGATGGTTACTTTGA
TATGGATCAAGCTTTCGACCGATTCAAGCTTAATATTTTTATCAGCTTGGCCGAACTTGAATCAGATAACATTGGAGAAC
AAGTCAGAAATGGGCTTCAAGAAAAAGCAAAGCAAGGTCGATTGATTACAACCCATGCGCCCTTTGGTTACGAATATCAC
AACGGAGCATTCATCATCAATCAAAATGAGTCACCAACGGTAAAGGCTGTATTCAATTATTACATTAAAGGTCATGGTTA
TAAGAAAATTGCACAGTTATTAGAAGAAGATAACACGTATATCAATCGACAACCCTATCAAGTTCGTAACATTATCATCA
ATCCTAATTATTGTGGTCGTGTCAACAATCAATATGGCCAATTCGACAATATGTTTCCTTCTATTGTTTCCACAAGTATA
TATGAGCAAGCGCAGAGACTTCGATCGCAAAAACAAATCAAACAGACATCTTCGGATAACCAACTAAAACAAAAAATCAA
ATGCCCATGTTGTAATGCAACACTTACAAATATGACCATTAGAAAAAAGAATCATACATTACGTTACTACGTCTGTCCTA
AAAACATGAATGCTTCACGCTTTGTCTGTGATTTTAAAGGCATCAATGCACAAACACTTGAAGATAAAGTATTAGAAGTG
TGCCGAGACTTTTATCAAAATCAACGCATCTACACAAAAATTAAAGGTGCGATTGACAAACGCATCAAAAGACAAAGAAA
CATAGAAAAACATCACACATTGACTCAAGAACAACTGATAGAAAAGTTGGCACAAGGCATCATCGATGCAGAAACGTTCA
GAGAACAAACGCAATCATTACGTCAACAACCGCAACGCACTACATCTATCAATGGACATCAAATACAACACACCATTCAA
AATATTATTCAAAAACGTTTCACGTTAAACATATTGTACCCCTATATTGAAACCATTCACATTACGAAAGATAAAAATCT
TATAGGAATCTATTTCAAAAATGAACCACTCAATATCGTCAATCAAACCATGCAATCATCGATTGCATAA

Domains

Predicted by InterProScan.

• Recombinase (Recombinase) (169-250)

• Recombinase zinc beta ribbon domain (Zn_ribbon_recom) (262-321)

• Resolvase, N terminal domain (Resolvase) (4-147)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccrA	Staphylococcus aureus N315	99.332	100	0.993
ccrA	Staphylococcus aureus COL	75.056	100	0.751