Detailed information NTG0422507

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: G3G86_RS06940
• Genome accession: NZ_CP048713
• Coordinates: 1444530..1445504 (+)
• Length: 324 a.a.
• NCBI ID: WP_002491905.1
• Uniprot ID: -
• Organism: Staphylococcus lugdunensis strain CGMH-SL138
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1439530..1450504

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G3G86_RS06905	rpmG	1439954..1440103 (+)	150	WP_001830957.1	50S ribosomal protein L33	-
G3G86_RS06910	-	1440353..1440889 (+)	537	WP_002459008.1	5-formyltetrahydrofolate cyclo-ligase	-
G3G86_RS06915	-	1440906..1442363 (+)	1458	WP_002491909.1	rhomboid family intramembrane serine protease	-
G3G86_RS06920	-	1442347..1442550 (+)	204	WP_002459010.1	YqgQ family protein	-
G3G86_RS06925	-	1442547..1443533 (+)	987	WP_002491907.1	ROK family glucokinase	-
G3G86_RS06930	-	1443533..1443856 (+)	324	WP_002459012.1	MTH1187 family thiamine-binding protein	-
G3G86_RS06935	-	1443860..1444483 (+)	624	WP_002459013.1	MBL fold metallo-hydrolase	-
G3G86_RS06940	comGA	1444530..1445504 (+)	975	WP_002491905.1	competence type IV pilus ATPase ComGA	Machinery gene
G3G86_RS06945	comGB	1445476..1446540 (+)	1065	WP_002478130.1	competence type IV pilus assembly protein ComGB	-
G3G86_RS06950	comGC	1446555..1446869 (+)	315	WP_002459016.1	competence type IV pilus major pilin ComGC	Machinery gene
G3G86_RS06955	comGD	1446802..1447296 (+)	495	WP_225306455.1	competence type IV pilus minor pilin ComGD	-
G3G86_RS06960	-	1447283..1447576 (+)	294	WP_002459018.1	hypothetical protein	-
G3G86_RS06965	-	1447638..1447997 (+)	360	WP_002459019.1	competence type IV pilus minor pilin ComGF	-
G3G86_RS06970	-	1448151..1448669 (+)	519	WP_002459021.1	shikimate kinase	-
G3G86_RS06975	gcvT	1448839..1449930 (+)	1092	WP_037540763.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 36993.89 Da
• Isoelectric Point: 8.2830

>NTDB_id=422507 G3G86_RS06940 WP_002491905.1 1444530..1445504(+) (comGA) [Staphylococcus lugdunensis strain CGMH-SL138]
MKILFKEIVNKAIQQNASDIHFIPSQTTVIIKFRVNDQLVYYEELNLSIYTKLLTFMKFQAGLDISTHQIAQSGRYTYQY
KQQYYLRISTLPLSLGTESCVIRIVPQYFQQHKTCYQFNDFKQFMNKKQGLLLFSGPTGSGKSTLMYQMVLYAQQELNLN
VITIEDPVEQLISGITQVSVNDKAGINYVSTFKAILRCDPDVILIGEIRNASIAKCVIQASLSGHLVLSTIHANNCKGTL
LRLLEMGISVQEICQSINLISNQRLITTLNQQRALVCEMMINHQIEYFFEHNHTLPKSFHHLSQLIGNMSKEGVICEETA
NKYT

Nucleotide

• Length: 975 bp

>NTDB_id=422507 G3G86_RS06940 WP_002491905.1 1444530..1445504(+) (comGA) [Staphylococcus lugdunensis strain CGMH-SL138]
ATGAAAATATTATTTAAGGAAATTGTTAACAAAGCGATACAACAGAATGCAAGTGATATTCACTTTATTCCAAGTCAAAC
TACTGTCATCATTAAATTTCGTGTTAATGACCAACTTGTATATTATGAAGAATTAAATTTAAGCATCTATACTAAACTGT
TAACGTTTATGAAATTTCAAGCTGGCTTAGATATATCAACACATCAAATCGCCCAAAGTGGAAGATATACCTATCAATAT
AAGCAACAATATTACTTAAGAATCTCAACTTTACCACTATCATTAGGTACAGAAAGTTGCGTCATTCGTATCGTACCACA
ATACTTTCAACAACATAAAACGTGTTACCAATTTAATGATTTCAAACAGTTTATGAATAAAAAGCAAGGATTGTTATTAT
TTAGTGGTCCAACTGGATCTGGTAAAAGTACACTGATGTATCAAATGGTTTTATATGCACAACAAGAGCTTAATTTAAAT
GTTATTACAATTGAAGATCCAGTTGAACAATTGATATCAGGCATTACACAAGTATCTGTAAATGATAAAGCAGGCATTAA
TTATGTATCAACATTTAAAGCTATTCTGCGCTGTGATCCTGATGTTATCTTAATTGGCGAAATTAGAAATGCCAGTATCG
CAAAATGTGTTATTCAGGCAAGTTTAAGTGGCCATTTAGTATTATCTACAATTCACGCAAACAACTGCAAAGGAACTTTA
TTAAGATTATTAGAAATGGGAATTTCAGTTCAAGAAATATGTCAATCAATTAATTTAATCTCTAATCAAAGACTCATTAC
CACCCTAAATCAACAACGAGCATTGGTTTGCGAAATGATGATAAATCATCAAATAGAATACTTTTTTGAACATAATCATA
CCTTGCCTAAATCATTTCATCATTTATCACAGTTAATTGGTAACATGTCAAAAGAAGGGGTCATTTGTGAAGAAACTGCT
AATAAATATACTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (8-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	70.588	99.691	0.704
comGA	Staphylococcus aureus N315	70.588	99.691	0.704