Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   G3G86_RS01825 Genome accession   NZ_CP048713
Coordinates   400445..401110 (+) Length   221 a.a.
NCBI ID   WP_002492581.1    Uniprot ID   A0A853V4B7
Organism   Staphylococcus lugdunensis strain CGMH-SL138     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 395445..406110
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G3G86_RS01805 - 395819..397090 (+) 1272 WP_002492564.1 nucleotide sugar dehydrogenase -
  G3G86_RS01810 wecB 397133..398272 (+) 1140 WP_037540933.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) -
  G3G86_RS01815 - 398458..399906 (-) 1449 WP_002478511.1 alkaline phosphatase -
  G3G86_RS12530 - 400125..400220 (+) 96 Protein_361 hypothetical protein -
  G3G86_RS01825 braR 400445..401110 (+) 666 WP_002492581.1 response regulator transcription factor Regulator
  G3G86_RS01830 braS 401116..402024 (+) 909 WP_002492577.1 sensor histidine kinase Regulator
  G3G86_RS01835 - 402130..402879 (+) 750 WP_002492476.1 ABC transporter ATP-binding protein -
  G3G86_RS01840 - 402872..404863 (+) 1992 WP_226956761.1 ABC transporter permease -
  G3G86_RS01845 - 404905..405354 (+) 450 WP_002492528.1 hypothetical protein -
  G3G86_RS01850 - 405441..405920 (+) 480 WP_002492544.1 DUF4064 domain-containing protein -

Sequence


Protein


Download         Length: 221 a.a.        Molecular weight: 25643.59 Da        Isoelectric Point: 4.7645

>NTDB_id=422491 G3G86_RS01825 WP_002492581.1 400445..401110(+) (braR) [Staphylococcus lugdunensis strain CGMH-SL138]
MRIMIVEDDVVIRESLAGELMKWNYDVVAVDTFDDIVSCFVKYEPGLVLLDINLPTLNGFHWCQEIRKSSNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVTKIQALLRRTYDLTVNHNETTVRDCKLIIDEATLYYKEESVHLSFTELQIIK
MLFDNQGKYVSRTALIEKCWESEHFIDDNTLAVNMTRLRKKLNSIGLEDFIETKKNIGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=422491 G3G86_RS01825 WP_002492581.1 400445..401110(+) (braR) [Staphylococcus lugdunensis strain CGMH-SL138]
ATGAGGATTATGATTGTTGAGGATGATGTTGTGATTCGCGAGAGTTTGGCTGGTGAACTGATGAAGTGGAATTATGATGT
GGTTGCTGTAGATACCTTTGATGATATTGTGTCTTGTTTCGTAAAGTATGAACCAGGTTTAGTGTTGTTGGACATTAATT
TACCTACATTGAATGGATTTCACTGGTGCCAAGAAATTCGCAAATCGTCAAATGTACCAATTATTTTTATTAGCTCACGC
ACGGATAATATGGATCAGATTATGGCGATACAAATGGGTGGAGATGACTTTATAGAAAAACCATTTAATCTGTCATTGAC
CGTAACAAAGATTCAAGCTTTGCTTCGTCGAACTTATGATTTAACTGTGAATCATAATGAAACGACAGTTCGTGACTGTA
AGTTGATTATTGATGAAGCAACGCTTTATTACAAAGAAGAATCGGTACATTTATCATTTACAGAGTTACAAATTATTAAA
ATGCTGTTTGATAATCAAGGTAAATATGTCAGTCGCACAGCGTTAATTGAAAAATGCTGGGAGTCTGAACACTTTATTGA
TGACAATACGCTTGCGGTAAATATGACACGCTTACGCAAAAAACTTAATTCTATAGGGCTTGAAGATTTTATTGAAACAA
AAAAGAATATAGGATATAAGGTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A853V4B7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

76.471

100

0.765


Multiple sequence alignment