Detailed information NTG0042248

Bioinformatically predicted

Overview

• Name: comP
• Type: Machinery gene
• Locus tag: PARA_RS09915
• Genome accession: NC_015964
• Coordinates: 2030619..2031305 (-)
• Length: 228 a.a.
• NCBI ID: WP_041918287.1
• Uniprot ID: -
• Organism: Haemophilus parainfluenzae T3T1
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2025619..2036305

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PARA_RS09900 (PARA_19520)	nrdR	2026415..2026864 (-)	450	WP_005695670.1	transcriptional regulator NrdR	-
PARA_RS09905 (PARA_19530)	recC	2026942..2030301 (-)	3360	WP_014065665.1	exodeoxyribonuclease V subunit gamma	-
PARA_RS09910 (PARA_19540)	comQ	2030339..2030605 (-)	267	WP_014065666.1	DUF5374 domain-containing protein	Machinery gene
PARA_RS09915 (PARA_19550)	comP	2030619..2031305 (-)	687	WP_041918287.1	DUF2572 family protein	Machinery gene
PARA_RS09920 (PARA_19560)	comO	2031302..2032018 (-)	717	WP_014065668.1	PulJ/GspJ family protein	Machinery gene
PARA_RS09925 (PARA_19570)	comN	2032015..2032533 (-)	519	WP_014065669.1	hypothetical protein	Machinery gene
PARA_RS09930 (PARA_19580)	suhB	2032733..2033533 (+)	801	WP_014065670.1	inositol-1-monophosphatase	-
PARA_RS09935 (PARA_19590)	bioB	2033578..2034594 (-)	1017	WP_014065671.1	biotin synthase BioB	-
PARA_RS09940 (PARA_19600)	thiQ	2034668..2035297 (-)	630	WP_014065672.1	thiamine ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 25584.62 Da
• Isoelectric Point: 9.2585

>NTDB_id=42248 PARA_RS09915 WP_041918287.1 2030619..2031305(-) (comP) [Haemophilus parainfluenzae T3T1]
MMMKKGIVTLTALILLSGLLALILLFDEQIFAFFRSQMSQRKYYVEQSLPLQKISQQQQTHICQNLPLNGAEKVKQVFFE
SSVAEDKVAYSVWCKRAELFKKSPTKGINENMLRDFISSEKQADFQPHFVKVDTILTVQKTPQVYWVTQSQLEIKGNVSG
ILLAEGNLTLTGKGRISGAVITGGSLKLEEGVTVAYGKAVVAKLVQEYSQWRLVDKSWSDLSAQDQSE

Nucleotide

• Length: 687 bp

>NTDB_id=42248 PARA_RS09915 WP_041918287.1 2030619..2031305(-) (comP) [Haemophilus parainfluenzae T3T1]
ATGATGATGAAAAAAGGGATTGTGACACTGACGGCTCTTATTTTACTTTCGGGATTATTGGCATTGATCTTATTATTTGA
TGAACAGATCTTTGCATTTTTTCGATCTCAAATGAGTCAGCGAAAATATTATGTAGAACAAAGTCTTCCTTTACAGAAAA
TCAGTCAGCAGCAACAAACGCACATTTGCCAAAACTTGCCTTTAAATGGTGCTGAAAAAGTGAAACAAGTCTTTTTCGAG
TCTTCAGTGGCAGAGGATAAAGTGGCCTATTCTGTTTGGTGTAAACGAGCAGAGTTATTTAAGAAGTCGCCCACAAAAGG
CATTAATGAAAATATGCTGCGAGATTTTATTTCCAGCGAAAAACAAGCTGATTTTCAACCGCACTTTGTGAAAGTAGATA
CTATTTTAACTGTTCAAAAAACACCGCAAGTATATTGGGTAACACAAAGCCAATTAGAAATTAAAGGGAATGTGAGTGGC
ATTTTGTTAGCAGAAGGGAATTTAACTTTAACTGGCAAAGGGCGAATTAGTGGTGCAGTGATTACAGGTGGTTCGCTTAA
GTTAGAGGAGGGCGTGACGGTGGCTTACGGTAAAGCTGTGGTAGCAAAACTCGTACAAGAATATAGCCAATGGCGTTTGG
TGGATAAAAGTTGGAGTGATTTAAGTGCGCAAGATCAAAGTGAATAA

Domains

Predicted by InterproScan.

• Protein of unknown function (DUF2572) (DUF2572) (5-221)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comP	Haemophilus influenzae Rd KW20	52.632	100	0.526