Detailed information NTG0422402

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: G3U99_RS06815
• Genome accession: NZ_CP048693
• Coordinates: 1416535..1419921 (-)
• Length: 1128 a.a.
• NCBI ID: WP_021455769.1
• Uniprot ID: -
• Organism: Vibrio coralliilyticus OCN008
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1411535..1424921

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G3U99_RS06800 (G3U99_06775)	-	1411981..1413006 (-)	1026	WP_021455768.1	ABC transporter permease	-
G3U99_RS06805 (G3U99_06780)	-	1413009..1413995 (-)	987	WP_006958093.1	ABC transporter permease	-
G3U99_RS06810 (G3U99_06785)	-	1414166..1415848 (-)	1683	WP_006958092.1	ABC transporter substrate-binding protein	-
G3U99_RS06815 (G3U99_06790)	chiS	1416535..1419921 (-)	3387	WP_021455769.1	response regulator	Regulator
G3U99_RS06820 (G3U99_06795)	rsmC	1420117..1421139 (-)	1023	WP_165579513.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
G3U99_RS06825 (G3U99_06800)	-	1421218..1422303 (-)	1086	WP_021455770.1	AI-2E family transporter	-
G3U99_RS06830 (G3U99_06805)	hemL	1422567..1423859 (-)	1293	WP_006958083.1	glutamate-1-semialdehyde 2,1-aminomutase	-
G3U99_RS06835 (G3U99_06810)	erpA	1424115..1424456 (+)	342	WP_019276906.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127105.88 Da
• Isoelectric Point: 6.2534

>NTDB_id=422402 G3U99_RS06815 WP_021455769.1 1416535..1419921(-) (chiS) [Vibrio coralliilyticus OCN008]
MFKLYRKQRFKRLQHTLMLAFLVLSITPLTIIAIFFLQSHTKDLQEQSTSHLISVRDSKQQQVTDYMYAKESEVMGFVRS
ELAYASGGRFYGLVNAFRSLGLDMAQAREYAQRRYIPGSGDQIKTSILPQSNVYTGTERYRLLHKRYHRAYLELLKRSDF
DDALLVDLEGNVTYSIFKHDNYGTNLLTGRFRDTNLGRTFHKLKTQVTEKRKSNEDYTPVIISDFEMDRGKPVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLIADTNNASAMKTLLVGADHKSRTMAYEQKDIDKSREVVDLALEGKSDVGTYTNTLGEA
TIAAYSPISFKGVDWAIVVEVPEKEAFARVHQLETLFVFAMLCAIVLVVAASHYLSNFITAPLLKLTWAAEKVSAGDLDT
DIINTERKDEIGRLAISFERMQRSIRDKILLIKQQNEELESNLKLIQKQNDELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALNSGANGPITADHKYQLDIIISSGQRLATLVDDLLDYHKMRYGNLDIETRAVDISGATRLVLELSTHLVGNKPIRI
INQVPNDPLWVCADPQRLEQVLYNLVGNAIKYTSEGKIVISATQVDDNIRVQVVDTGQGIPAEQLEHIFEPLIQAGSDSS
RYRQGAGLGLSISRQLIDLMQGTLYVSSQPMVGTTFSFTLPIASTEQIGLASHIEGAHFIAPENNDLEIIEGSNLPENPD
GPLLLVVDDEPVNLRVLDSFLRLEGYRVRTAKNGEEAVESVGHEKPELMLLDIMMPGMSGYQVCEVLRKDYDHAQLPVIM
LTALNQPDDRVRGFEAGANDYLSKPFNKQELAARITAHLTASKAEQRRIENQQLQTELKQRAMVEASLLETQGRLLEQLE
SAPEAIICVRDDNKIRFTNDAASRLFKRTTEQLRRSNADELIAPKFLNVEQPHYCGVIDVYVEDVRQHLSADILKLPQGS
GLKSMYIFNVGGSVNAARINNLETAVEALSSYAFEGDKAKLQELKELGGEFTRLADRATTDSKSKQEVMREVLVDAMTSA
LTYWESVTGQSKFAFAEQSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSLEYILEHCKEMSPERTHIESLRD
KLQHLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=422402 G3U99_RS06815 WP_021455769.1 1416535..1419921(-) (chiS) [Vibrio coralliilyticus OCN008]
ATGTTTAAGTTGTACCGAAAACAAAGATTTAAGCGCCTGCAACACACTTTAATGCTGGCATTTCTTGTCTTGAGTATTAC
GCCACTCACGATCATCGCCATCTTTTTCCTCCAGTCTCATACCAAAGATTTGCAGGAGCAAAGTACTTCGCACTTAATCT
CCGTACGAGACAGTAAGCAGCAACAAGTCACTGACTACATGTACGCCAAAGAGTCGGAAGTCATGGGCTTTGTTCGCTCT
GAACTGGCTTATGCCAGTGGCGGGCGTTTCTACGGCTTAGTCAATGCGTTTCGCAGCTTAGGACTGGATATGGCTCAGGC
ACGCGAATACGCTCAGCGGCGTTACATTCCTGGCTCAGGCGATCAGATCAAAACCTCAATACTGCCTCAGTCCAATGTTT
ATACTGGTACGGAGCGTTATCGACTGCTGCATAAACGTTATCACAGAGCCTACCTGGAACTGCTCAAACGCTCAGACTTT
GACGACGCTTTGCTGGTTGATTTAGAAGGTAACGTCACCTACTCCATCTTTAAACACGACAACTACGGCACCAATCTGCT
GACTGGCCGCTTTCGTGATACCAATCTAGGCAGAACCTTCCACAAGCTGAAAACTCAGGTTACTGAAAAGCGTAAATCCA
ATGAAGATTACACACCGGTGATCATTTCAGACTTTGAGATGGACAGAGGTAAACCTGTCGCTTGGCTCGGCGCTCCTATC
GTCCAACAAGGTTATCTTCACAGCTATGCCATGTTCCGCTTACCAAATAATGGCATCACTAAGCTAATCGCCGATACCAA
CAACGCTTCAGCAATGAAAACCTTGCTGGTCGGTGCTGACCATAAATCAAGAACCATGGCTTATGAGCAAAAAGACATCG
ACAAGAGCCGCGAAGTTGTTGATTTAGCGTTGGAAGGAAAATCCGATGTCGGGACATACACAAACACGCTCGGAGAAGCG
ACCATCGCGGCTTACAGCCCAATTTCGTTTAAGGGTGTCGACTGGGCCATTGTGGTAGAAGTGCCAGAAAAAGAAGCTTT
TGCACGCGTCCACCAACTCGAAACTCTGTTCGTATTTGCCATGCTATGTGCAATTGTACTGGTGGTTGCCGCGTCCCATT
ACTTATCTAATTTTATTACCGCACCTTTATTGAAGTTGACGTGGGCGGCAGAAAAAGTCTCGGCTGGCGATCTCGATACG
GACATCATCAATACAGAGCGAAAAGATGAGATAGGCCGACTCGCCATCAGTTTTGAGCGCATGCAACGCTCCATTCGCGA
CAAAATACTGCTCATAAAACAGCAAAATGAAGAGCTGGAAAGCAACCTAAAACTGATCCAAAAGCAAAATGACGAGCTGC
AATTGGCGAACAAACTCAAAGATGAGTTCCTCGCCACCACCTCTCATGAATTGCGAACTCCACTCCATGGCATGGTAGGT
ATCGCAGAAGCACTAAATTCCGGAGCCAATGGGCCAATTACCGCGGATCACAAGTACCAGCTCGATATCATCATCAGTAG
CGGCCAGCGCTTGGCCACCTTGGTTGATGACCTGCTTGATTACCACAAAATGCGTTACGGTAATCTCGATATTGAAACCC
GAGCAGTGGATATCTCCGGTGCTACGCGCTTGGTGCTCGAACTGTCGACTCACTTAGTGGGCAACAAACCCATTCGCATC
ATTAATCAGGTTCCTAACGATCCGCTATGGGTATGCGCCGACCCTCAACGCTTAGAGCAAGTGCTATACAATCTCGTTGG
TAACGCCATCAAATACACCAGTGAAGGTAAAATCGTCATTTCCGCCACTCAGGTCGACGACAACATCCGAGTTCAAGTAG
TAGATACTGGTCAGGGGATCCCTGCTGAGCAACTTGAGCACATTTTTGAACCCCTGATTCAGGCTGGCAGTGATAGCAGC
CGTTATCGCCAAGGGGCCGGCCTTGGTCTATCTATCAGCCGTCAGTTGATTGATTTGATGCAAGGCACTCTCTACGTCAG
CAGCCAACCTATGGTTGGTACGACATTTAGCTTCACTTTGCCAATCGCCTCAACCGAGCAAATAGGCCTCGCAAGCCATA
TCGAAGGTGCGCATTTCATTGCTCCAGAAAACAATGACCTAGAGATAATCGAAGGCTCAAATTTACCGGAGAATCCAGAC
GGGCCATTGCTGTTAGTGGTCGATGATGAACCGGTCAACCTGCGTGTCTTAGATAGCTTCCTTCGCCTTGAAGGCTACCG
AGTACGCACCGCGAAAAATGGAGAAGAAGCCGTTGAATCCGTTGGTCATGAAAAACCAGAGCTGATGCTACTCGATATCA
TGATGCCGGGAATGAGCGGCTATCAGGTGTGTGAAGTGCTGCGTAAAGACTATGATCATGCTCAGCTCCCCGTCATCATG
CTTACAGCATTGAATCAGCCCGATGACAGAGTTCGAGGTTTCGAAGCCGGAGCCAATGACTACTTATCAAAACCTTTTAA
CAAACAAGAGCTCGCCGCACGAATTACGGCGCATCTAACCGCAAGCAAAGCCGAACAACGCCGGATTGAAAACCAGCAGC
TACAAACTGAACTTAAACAGCGCGCTATGGTTGAAGCCAGTTTACTAGAAACTCAGGGGCGTTTATTAGAGCAATTAGAG
TCAGCCCCAGAAGCGATTATCTGTGTACGTGACGACAATAAAATCCGCTTCACCAATGATGCCGCCTCTCGTCTATTTAA
GCGCACCACAGAACAATTACGCCGTTCTAATGCGGATGAATTGATTGCACCAAAATTCCTTAACGTCGAACAGCCGCACT
ACTGTGGCGTCATTGATGTTTATGTCGAAGATGTCCGCCAGCACTTGTCCGCAGACATTCTCAAACTACCACAAGGCTCT
GGACTCAAATCCATGTACATCTTTAACGTGGGTGGCAGTGTCAACGCCGCGCGGATCAATAACCTAGAAACCGCGGTTGA
AGCCCTTTCCAGCTACGCGTTTGAAGGGGATAAGGCCAAACTGCAAGAGTTAAAAGAGTTAGGTGGAGAGTTTACGCGGT
TAGCCGATCGGGCTACCACTGACAGCAAATCCAAGCAAGAAGTCATGCGTGAAGTCTTAGTCGATGCAATGACAAGTGCG
CTAACTTATTGGGAAAGCGTTACTGGTCAAAGCAAGTTTGCTTTCGCAGAGCAAAGCGGATTATGGCGTGTGTACCTCGA
CCGTAGCACCTTACAGACTCGGACTCTGGACAAATACCTGCGAGTCGAAACGTTACCAAAAACACCGCGCTGGCGAACGG
TACTGAGTTCTCTTGAATACATCCTTGAACACTGTAAAGAAATGAGCCCAGAGCGCACTCATATTGAGAGCCTTCGCGAT
AAGCTGCAACATCTCCTAACCAGCTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• Response regulator receiver domain (Response_reg) (725-835)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-682)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	79.167	100	0.792