Detailed information NTG0422383

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: G3U99_RS03235
• Genome accession: NZ_CP048693
• Coordinates: 689162..690169 (-)
• Length: 335 a.a.
• NCBI ID: WP_006963339.1
• Uniprot ID: A0A097QNP8
• Organism: Vibrio coralliilyticus OCN008
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 684162..695169

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G3U99_RS03205 (G3U99_03195)	frdC	684739..685122 (+)	384	WP_021457300.1	fumarate reductase subunit FrdC	-
G3U99_RS03210 (G3U99_03200)	frdD	685135..685512 (+)	378	WP_021457299.1	fumarate reductase subunit FrdD	-
G3U99_RS03215 (G3U99_03205)	-	685572..686255 (-)	684	WP_065740850.1	nitroreductase family protein	-
G3U99_RS03220 (G3U99_03210)	hslU	686420..687754 (-)	1335	WP_021457296.1	HslU--HslV peptidase ATPase subunit	-
G3U99_RS03225 (G3U99_03215)	hslV	687792..688337 (-)	546	WP_006963336.1	ATP-dependent protease subunit HslV	-
G3U99_RS03230 (G3U99_03220)	-	688499..689047 (-)	549	WP_031342989.1	SPOR domain-containing protein	-
G3U99_RS03235 (G3U99_03225)	cytR	689162..690169 (-)	1008	WP_006963339.1	DNA-binding transcriptional regulator CytR	Regulator
G3U99_RS03240 (G3U99_03230)	priA	690418..692619 (-)	2202	WP_165579450.1	primosomal protein N'	-
G3U99_RS03245 (G3U99_03235)	rpmE	692911..693129 (+)	219	WP_019277580.1	50S ribosomal protein L31	-
G3U99_RS03250 (G3U99_03240)	-	693381..694658 (+)	1278	WP_021457294.1	malic enzyme-like NAD(P)-binding protein	-
G3U99_RS03255 (G3U99_03245)	metJ	694746..695066 (-)	321	WP_006963343.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36965.58 Da
• Isoelectric Point: 6.0455

>NTDB_id=422383 G3U99_RS03235 WP_006963339.1 689162..690169(-) (cytR) [Vibrio coralliilyticus OCN008]
MATMKDVAQLAGVSTATVSRALMNPEKVSSATRKRVEDAVLEAGYSPNSLARNLRRNESKTIIAIIPDICDPYYTEIIRG
IEDAAMEHGYIVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQMGHKRIAQISGPSSAVLCQFRYQGYQQALRRAGISMNPNYCIYGDFSFEDGAKAVRQLLALPEPPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TQLVVRESAAPPRVI

Nucleotide

• Length: 1008 bp

>NTDB_id=422383 G3U99_RS03235 WP_006963339.1 689162..690169(-) (cytR) [Vibrio coralliilyticus OCN008]
ATGGCGACAATGAAGGATGTTGCTCAGCTAGCAGGCGTTTCAACTGCAACAGTATCGCGTGCTCTAATGAACCCGGAAAA
AGTATCTTCAGCTACAAGGAAGCGAGTAGAAGATGCAGTATTAGAAGCCGGATATTCACCAAATTCTCTGGCGCGCAACC
TGCGCCGAAATGAGTCCAAAACGATAATTGCAATCATCCCGGATATTTGTGATCCCTACTACACAGAGATCATCCGTGGA
ATTGAAGACGCTGCGATGGAACATGGATACATCGTGCTGCTGGGAGACAGTGGTCAGCAGAAAAAGCGTGAGAGTTCTTT
TGTCAATCTTGTCTTTACTAAGCAGGCCGATGGAATGTTGCTGCTTGGTACTGATCTGCCGTTTGACGTCAGCAAACCGG
AGCAGAAAAACCTGCCGCCTATGGTGATGGCATGTGAGTTTGCACCTGAACTGGAGCTGCCAACGGTACACATTGATAAC
CTGACATCGGCATTTGAAGCGGTGAACTATCTTACGCAGATGGGTCACAAGCGCATAGCTCAGATTTCGGGCCCTAGCTC
TGCGGTGCTATGCCAGTTCCGTTACCAAGGATACCAGCAAGCGCTACGCCGAGCTGGCATCAGTATGAACCCGAATTACT
GCATCTACGGCGACTTCTCGTTTGAAGATGGTGCGAAAGCTGTCAGACAATTGTTGGCTTTACCTGAGCCGCCAACCGCG
ATTTTCTGTCACAACGATGCGATGGCCATCGGGGCGATTCAAGAAGCGAAGAAGCTGGGCTTGCGCGTCCCGCAAGACCT
GTCTGTCGTTGGCTTTGATGATATTCAGTTTGCTCAGTACTGCGATCCACCACTGACGACGATTTCTCAGCCACGTTACG
AGATTGGCCGACAGGCAATGTTGATGATGCTTGAGTTGTTGCGCGGCCATGATGTTCGTGCCGGTTCTCGATTGCTGGAA
ACTCAGCTGGTTGTCAGGGAAAGCGCTGCTCCACCGCGAGTCATCTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A097QNP8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	92.771	99.104	0.919
cytR	Vibrio parahaemolyticus RIMD 2210633	90.09	99.403	0.896