Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   G3T58_RS16980 Genome accession   NZ_CP048687
Coordinates   3317904..3318362 (-) Length   152 a.a.
NCBI ID   WP_000804868.1    Uniprot ID   A0A0J1HZV6
Organism   Bacillus paranthracis strain MN1F     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3312904..3323362
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G3T58_RS16955 - 3313102..3314643 (-) 1542 WP_000445753.1 MDR family MFS transporter -
  G3T58_RS16960 - 3315069..3315569 (+) 501 WP_000708168.1 hypothetical protein -
  G3T58_RS16965 - 3315509..3315754 (-) 246 Protein_3315 hypothetical protein -
  G3T58_RS16970 - 3315919..3316560 (+) 642 WP_000680836.1 diguanylate cyclase -
  G3T58_RS16975 - 3317210..3317872 (+) 663 WP_000922491.1 YkyA family protein -
  G3T58_RS16980 kre 3317904..3318362 (-) 459 WP_000804868.1 YkyB family protein Regulator
  G3T58_RS16985 ppx 3318541..3320076 (+) 1536 WP_000658868.1 exopolyphosphatase -
  G3T58_RS16990 - 3320185..3322293 (+) 2109 WP_000423557.1 polyphosphate kinase -
  G3T58_RS16995 - 3322453..3322689 (-) 237 WP_000283743.1 hypothetical protein -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17787.52 Da        Isoelectric Point: 10.6793

>NTDB_id=422346 G3T58_RS16980 WP_000804868.1 3317904..3318362(-) (kre) [Bacillus paranthracis strain MN1F]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=422346 G3T58_RS16980 WP_000804868.1 3317904..3318362(-) (kre) [Bacillus paranthracis strain MN1F]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAATCCGAAGTATTTATACTGGTTAAAAAAGACAGCTTTAGAACGCTTAATTACTGAAA
AAAAAGCTATTAAAGAAGGATTACATTTCTCTAGAAATCCACGTTTTAGCCAACAACAATCTGATGTTCTTATACGTTTA
GGTGATTACTTTTTCCATATTCCTCCTACAAAAGAAGATTTTCGAATCCTACCACATCTCGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCGCTAAAAC
AAGAAAAAAAATTAAGTGAACCTGTCCCATGGTATAGTCGTACCTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0J1HZV6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493

Multiple sequence alignment