Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   G3T58_RS16930 Genome accession   NZ_CP048687
Coordinates   3307544..3307978 (+) Length   144 a.a.
NCBI ID   WP_000811499.1    Uniprot ID   A0A1J9ZQC5
Organism   Bacillus paranthracis strain MN1F     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 3302544..3312978
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G3T58_RS16910 - 3303442..3304599 (-) 1158 WP_000434567.1 aminotransferase A -
  G3T58_RS16915 - 3304723..3304923 (-) 201 WP_000929285.1 hypothetical protein -
  G3T58_RS16920 kinB 3305233..3306507 (+) 1275 WP_000420386.1 sporulation sensor histidine kinase KinB -
  G3T58_RS16925 - 3306558..3307307 (-) 750 WP_000388462.1 DUF3967 domain-containing protein -
  G3T58_RS16930 nucA/comI 3307544..3307978 (+) 435 WP_000811499.1 DNA-entry nuclease Machinery gene
  G3T58_RS16935 comJ 3308015..3308404 (+) 390 WP_000424028.1 competence protein ComJ -
  G3T58_RS16940 metE 3308442..3310730 (-) 2289 WP_001007591.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  G3T58_RS16945 - 3311399..3311956 (-) 558 WP_000062073.1 PadR family transcriptional regulator -
  G3T58_RS16950 - 3312116..3312903 (-) 788 Protein_3312 RNA-guided endonuclease TnpB family protein -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 15996.35 Da        Isoelectric Point: 8.4331

>NTDB_id=422345 G3T58_RS16930 WP_000811499.1 3307544..3307978(+) (nucA/comI) [Bacillus paranthracis strain MN1F]
MKQLKGIIISIIAILSIVVAVYEVLVPEETSIKKTNAYDQVLEFPKDRYPETGKHITDAIKEGHSEVCTIDRGGAADRRK
LSLAPYPSKKGYDRDEWPMAMCKEGGKGAHIEYISPADNRGAGSWVGNKLDKYPDGTRVKFDVK

Nucleotide


Download         Length: 435 bp        

>NTDB_id=422345 G3T58_RS16930 WP_000811499.1 3307544..3307978(+) (nucA/comI) [Bacillus paranthracis strain MN1F]
ATGAAGCAATTAAAAGGTATTATCATTTCAATTATTGCAATTCTTTCTATTGTAGTAGCGGTGTATGAAGTGCTTGTTCC
AGAGGAAACAAGTATTAAAAAAACAAATGCGTATGATCAAGTTCTAGAATTTCCGAAAGATCGATACCCAGAGACAGGGA
AACATATTACGGATGCTATAAAAGAAGGGCATTCAGAAGTGTGTACAATCGACCGTGGTGGAGCTGCGGATAGAAGAAAA
TTATCGTTAGCTCCATACCCATCAAAAAAAGGGTATGATCGTGATGAATGGCCAATGGCGATGTGTAAAGAAGGCGGAAA
AGGAGCGCACATCGAATATATAAGTCCAGCAGATAATCGCGGAGCAGGCTCTTGGGTAGGAAATAAGTTAGATAAATACC
CAGATGGTACGCGTGTAAAATTTGACGTAAAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(49-139)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1J9ZQC5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

72.072

77.083

0.556

Multiple sequence alignment