Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   G3T58_RS03250 Genome accession   NZ_CP048687
Coordinates   629928..630611 (-) Length   227 a.a.
NCBI ID   WP_000350710.1    Uniprot ID   Q81TR3
Organism   Bacillus paranthracis strain MN1F     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 624928..635611
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G3T58_RS03235 pepF 625109..626935 (-) 1827 WP_000003390.1 oligoendopeptidase F Regulator
  G3T58_RS03240 - 626986..628230 (-) 1245 WP_000612264.1 competence protein CoiA family protein -
  G3T58_RS03245 - 628311..629855 (-) 1545 WP_000799204.1 cardiolipin synthase -
  G3T58_RS03250 mecA 629928..630611 (-) 684 WP_000350710.1 adaptor protein MecA Regulator
  G3T58_RS03255 - 630951..631625 (+) 675 WP_000362603.1 TerC family protein -
  G3T58_RS03260 spx 631675..632070 (-) 396 WP_000258267.1 transcriptional regulator Spx -
  G3T58_RS03265 - 632663..632866 (+) 204 WP_000559978.1 hypothetical protein -
  G3T58_RS03270 - 632895..634541 (-) 1647 WP_000728616.1 peptide ABC transporter substrate-binding protein -

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26966.00 Da        Isoelectric Point: 3.9822

>NTDB_id=422310 G3T58_RS03250 WP_000350710.1 629928..630611(-) (mecA) [Bacillus paranthracis strain MN1F]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQAGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=422310 G3T58_RS03250 WP_000350710.1 629928..630611(-) (mecA) [Bacillus paranthracis strain MN1F]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGCTTTAATCG
TGAGGAAATTTGGTATGACCGCGAAAGAAGCGAAGAGCTCTTTTGGGAAATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCAGAACTT
TCAAAGGATGGACAAAAGCTAGAACTACCAATAGGTGTAGATAAAATTATAGACATTCCTCTAGATGAAGGTATTGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAGGAACAAGCAGGTACAAACTTTAACGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATTGATCGCATTTTAAG
CATTGTTTTAGAATACGGGGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGGAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACAATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q81TR3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.14

100

0.564


Multiple sequence alignment