Detailed information NTG0422239

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: G0030_RS07995
• Genome accession: NZ_CP048681
• Coordinates: 1702602..1703237 (-)
• Length: 211 a.a.
• NCBI ID: WP_152342358.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain Q186-3_T
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1697602..1708237

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G0030_RS07965 (G0030_07950)	-	1697975..1698406 (-)	432	WP_168384129.1	SRPBCC family protein	-
G0030_RS07970 (G0030_07955)	tadA	1698464..1698985 (-)	522	WP_104488986.1	tRNA adenosine(34) deaminase TadA	-
G0030_RS07975 (G0030_07960)	-	1698989..1700113 (-)	1125	WP_005177517.1	enoyl-CoA hydratase/isomerase family protein	-
G0030_RS07980 (G0030_07965)	ung	1700110..1700823 (-)	714	WP_005177514.1	uracil-DNA glycosylase	-
G0030_RS07985 (G0030_07970)	-	1700865..1701461 (-)	597	WP_005177512.1	6-carboxytetrahydropterin synthase	-
G0030_RS07990 (G0030_07975)	gspK	1701609..1702556 (-)	948	WP_180181972.1	type II secretion system minor pseudopilin GspK	-
G0030_RS07995 (G0030_07980)	xcpW	1702602..1703237 (-)	636	WP_152342358.1	type II secretion system minor pseudopilin GspJ	Machinery gene
G0030_RS08000 (G0030_07985)	xcpV	1703234..1703578 (-)	345	WP_242898261.1	type II secretion system protein	Machinery gene
G0030_RS08005 (G0030_07990)	-	1703721..1704293 (-)	573	WP_180181971.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
G0030_RS08010 (G0030_07995)	-	1704299..1704913 (-)	615	WP_016658223.1	TetR/AcrR family transcriptional regulator	-
G0030_RS08015 (G0030_08000)	-	1704974..1705747 (-)	774	WP_168381360.1	TatD family hydrolase	-
G0030_RS08020 (G0030_08005)	-	1705777..1706118 (-)	342	WP_005177501.1	PilZ domain-containing protein	-
G0030_RS08025 (G0030_08010)	-	1706130..1707113 (-)	984	WP_005177500.1	DNA polymerase III, delta' subunit	-
G0030_RS08030 (G0030_08015)	kdsB	1707122..1707886 (-)	765	WP_163142007.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 211 a.a.
• Molecular weight: 24148.46 Da
• Isoelectric Point: 7.2000

>NTDB_id=422239 G0030_RS07995 WP_152342358.1 1702602..1703237(-) (xcpW) [Acinetobacter indicus strain Q186-3_T]
MIKAKRGFTLVELLVAIAIFAVLSALGWKVFDYLVKVKDRNQWHEQQLEGLQGAYQQILRDSIQIVPLTANINNDIQPAL
VLQNGRFNFSKTGVTDPLQQGIAPTERIEYQYRADEQKLYRLKYANLHQSGQDQPVSSVLLDNVSQFQVSVLNPQELSNW
PDSSIDLNDNQQKRKLPKGIKINLTVQDVQYEWIFSLLNTDFLKSDNKTTS

Nucleotide

• Length: 636 bp

>NTDB_id=422239 G0030_RS07995 WP_152342358.1 1702602..1703237(-) (xcpW) [Acinetobacter indicus strain Q186-3_T]
ATGATTAAGGCTAAACGCGGATTTACTCTGGTCGAGCTGCTGGTGGCCATTGCCATCTTTGCGGTGCTGTCTGCCTTAGG
CTGGAAAGTATTTGATTATCTGGTCAAGGTCAAAGACCGTAACCAGTGGCATGAACAGCAGTTAGAAGGATTGCAGGGTG
CCTATCAGCAAATCTTGCGTGACAGCATTCAGATTGTACCGCTGACGGCCAACATCAATAATGATATTCAGCCAGCTTTG
GTATTACAAAACGGCCGTTTTAATTTTAGCAAGACCGGTGTGACCGATCCTTTGCAGCAGGGCATTGCCCCCACTGAACG
GATTGAATATCAGTACCGGGCCGACGAACAAAAACTGTATCGTCTGAAATATGCCAATTTGCATCAATCCGGGCAGGATC
AGCCGGTTTCCAGCGTATTATTGGACAATGTTAGCCAGTTTCAGGTTAGTGTGCTGAATCCGCAGGAACTGAGTAACTGG
CCAGACAGCAGTATTGACTTAAATGATAATCAACAAAAACGCAAACTGCCAAAAGGCATTAAAATAAATTTAACCGTACA
AGATGTACAATATGAATGGATTTTTAGCCTGTTAAATACTGACTTCCTGAAATCAGACAATAAAACCACATCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (3-26)

• Type II secretion system (T2SS), protein J (T2SSJ) (60-194)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	61.735	92.891	0.573