Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   G0030_RS03655 Genome accession   NZ_CP048681
Coordinates   768009..772502 (+) Length   1497 a.a.
NCBI ID   WP_180182252.1    Uniprot ID   -
Organism   Acinetobacter indicus strain Q186-3_T     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 763009..777502
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G0030_RS03630 (G0030_03625) - 763503..764096 (-) 594 WP_180182250.1 hypothetical protein -
  G0030_RS03635 (G0030_03630) pilG 764426..764809 (+) 384 WP_005179541.1 twitching motility response regulator PilG Regulator
  G0030_RS03640 (G0030_03635) - 764826..765194 (+) 369 WP_005179539.1 PleD family two-component system response regulator -
  G0030_RS03645 (G0030_03640) - 765198..765734 (+) 537 WP_005179538.1 chemotaxis protein CheW -
  G0030_RS03650 (G0030_03645) - 765780..767852 (+) 2073 WP_180182251.1 methyl-accepting chemotaxis protein -
  G0030_RS03655 (G0030_03650) chpA 768009..772502 (+) 4494 WP_180182252.1 Hpt domain-containing protein Regulator
  G0030_RS03660 (G0030_03655) - 772499..772960 (+) 462 WP_180182253.1 hypothetical protein -
  G0030_RS03665 (G0030_03660) dapE 773030..774163 (-) 1134 WP_005179534.1 succinyl-diaminopimelate desuccinylase -
  G0030_RS03670 (G0030_03665) - 774290..774436 (-) 147 WP_005179532.1 entericidin A/B family lipoprotein -
  G0030_RS03675 (G0030_03670) - 774537..775439 (-) 903 WP_180182254.1 DUF1853 family protein -
  G0030_RS03680 (G0030_03675) - 775530..775919 (+) 390 WP_075167111.1 YbaN family protein -
  G0030_RS03685 (G0030_03680) elsL 775916..776446 (+) 531 WP_104488696.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence

Protein


Download         Length: 1497 a.a.        Molecular weight: 166900.29 Da        Isoelectric Point: 4.2927

>NTDB_id=422234 G0030_RS03655 WP_180182252.1 768009..772502(+) (chpA) [Acinetobacter indicus strain Q186-3_T]
MKEILKNLVETTALPEDSYLDQDAEILEIFVEEIEEIFVELKDLLAQWATQPNDQETLTTIRRHFHTLKGSGRMVGAKSA
GELAWTVEDTLNRVISGSLTLSAQVQQFATAVANVFEYKLYPSFKHAQPMALDLRPLVLLGQQLQQNLSPEPALEELLQL
ASSLRSSDSITGLEFDTASTDEQVAADTELAVADSVEEDPLAAETLAIFIEEAEEHLLTVDRFLAHDELKTQDYNGLIRA
LHTLRGSSSMAHIEQIFDASSKVENLFKTLLQDEIESTSKETALLLQYAEFVRDYLHLLPQNDSAGMDRIYQTFNTAWQN
YGFSLEDVDESVNPQGLVSKLIELNIDQLLDAEFEFDQRAQAEYPEYIQTLSHQAKLLVERTDNRASQGIHDFTQELQLA
YAALLDKPSLLHSDYAFELFGQAHQEFIHLFDTLAAGQRVSLSEDAQQIINNLSAFVQQDIEALSPETDTTEAVTETVEA
GAGLNLAVLSQRLEADRQYMDSAEANKDFDPDLLDIFLEEAEELLTGIDQDVNSWSQDPSNTAALNNLMRHLHTLKGGAN
MIAASHIGLIAHHLETIYERIINRQMSASTALIQIIRLVQDNIADRIQTIREQQVDYPAQESLAILENISELAQGQLVEA
ESLAVAAEATSSADVQQSDASALEFELEQPAPAETAYTAPEDEQPDTSSEPVLEDAPTLAEQTIPTDAVSTTENDGEDNL
HSIVEETFLEEAEELLDTTESLLKQWFDHRSDRSILLQLQRSAHSLKGGARMAEIEPVAVIAYQLENTFEQFAVHQFNSN
AYDALLNTTVAWLKEAIFQRDYSNFDSLKASLESIEYVNATAQLPERFNTADLMAPSKTFEFVQGDGAEPPSMQGEWSET
AQLDNSNEMIRISADLVEKMIDLSGENAINRSRIEMELGQLGGTLNEMELAIKRLADQLRRMEGELESQIIAKHGDEHSR
YTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLADKIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRMLPRLQRIV
RQTSSTLNRPAELVVHNTEGELDRTILERLISPFEHMLRNAVDHGLEDAAVRKQAAKPEVGQIELNIGRQGTDVLISFTD
DGKGIDETKIHAKALSLGLIQPEQQLDKKEILQLIFHPGFSTAQAVTQISGRGVGLDVVQSEIKALGGHVEVDSELGKGT
TFSIRVPTTVAVSDALMVKVGDQQFAIPLAQIDRIVRISPSALESYFSSKDDYFKIDQQNYKLRYLSEFVANQPLPRLSN
IAHSLPVLLIKGNTGQTIALLVDQLIGSRGQIVMKPIGQQFSSVGSIAGATILGDGQVCLILDGQNIARQIQATQRIKHV
MEPREVQRRDTRHLVMIVDDSVTVRKVTSRLLERQGFDVVTAKDGVDAIEQLENVKPDLMLLDIEMPRMDGFEVTTLVRR
HDIHRDLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIENILHSSEAKA

Nucleotide


Download         Length: 4494 bp        

>NTDB_id=422234 G0030_RS03655 WP_180182252.1 768009..772502(+) (chpA) [Acinetobacter indicus strain Q186-3_T]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACGACTGCGCTTCCTGAAGATAGTTATCTTGATCAAGATGCAGAAATTCT
AGAAATTTTTGTTGAAGAAATTGAAGAAATCTTCGTTGAGCTAAAAGACCTGTTGGCTCAATGGGCCACGCAGCCTAACG
ATCAGGAAACGCTAACCACCATTCGCCGTCATTTTCATACCTTAAAAGGTTCGGGACGTATGGTTGGTGCCAAGTCGGCA
GGGGAGCTGGCCTGGACGGTTGAAGATACCTTAAACCGGGTCATTTCCGGTAGCCTGACCCTGTCAGCGCAGGTGCAGCA
GTTTGCAACCGCGGTGGCGAACGTCTTTGAATACAAACTTTATCCAAGCTTTAAACATGCCCAGCCGATGGCGCTGGACC
TGCGTCCATTGGTGCTATTAGGACAACAATTACAACAAAATTTAAGTCCTGAACCGGCTTTAGAAGAGCTGTTACAACTG
GCAAGCAGCCTAAGGTCCAGCGACAGTATCACTGGTCTGGAGTTTGATACAGCAAGTACTGATGAGCAGGTTGCTGCAGA
CACCGAGCTGGCTGTGGCTGATAGTGTTGAAGAAGATCCGCTAGCAGCTGAAACACTGGCCATCTTTATTGAAGAAGCGG
AAGAACACCTGTTAACGGTGGATCGCTTCCTGGCACACGATGAGCTGAAAACCCAAGATTACAATGGCCTGATTCGTGCC
CTGCATACCTTGCGCGGCAGTTCATCCATGGCACACATCGAGCAGATTTTTGATGCCAGCTCCAAGGTAGAAAACCTGTT
CAAGACCCTGTTACAGGATGAAATTGAATCGACTTCCAAAGAAACCGCACTGTTATTGCAATATGCTGAATTTGTGCGGG
ATTATCTGCATCTGTTGCCGCAGAATGACAGTGCCGGCATGGACCGGATTTATCAGACTTTCAATACTGCATGGCAGAAC
TATGGCTTTAGCCTGGAAGATGTTGATGAATCAGTGAATCCGCAAGGTCTGGTATCCAAGCTGATTGAACTGAATATTGA
TCAGTTGCTCGATGCTGAGTTCGAATTTGACCAGCGTGCGCAGGCTGAATATCCGGAATATATCCAGACCCTGAGCCATC
AGGCGAAGCTGCTGGTAGAGCGTACCGATAACCGCGCCTCTCAGGGTATTCATGATTTTACCCAGGAATTACAACTGGCC
TATGCGGCCTTGCTGGACAAGCCAAGCCTGCTGCATAGCGATTATGCCTTTGAATTATTTGGACAGGCGCATCAGGAATT
TATCCATCTGTTTGATACCCTGGCTGCCGGGCAACGCGTCAGCTTAAGCGAAGATGCTCAGCAGATCATCAATAACCTGA
GTGCCTTTGTACAGCAGGATATTGAAGCACTAAGCCCAGAAACTGATACCACAGAAGCTGTAACCGAAACGGTTGAAGCC
GGTGCCGGGCTGAATCTGGCCGTATTGTCACAGCGTCTGGAAGCTGACCGTCAATACATGGATAGCGCTGAAGCCAACAA
GGACTTTGATCCAGACCTGCTGGACATTTTCCTGGAAGAGGCCGAAGAGTTACTTACGGGTATTGACCAGGATGTTAACA
GCTGGAGCCAAGACCCGAGCAATACTGCTGCGCTGAACAATCTGATGCGCCATTTGCACACCTTAAAAGGTGGTGCCAAC
ATGATTGCAGCCAGCCATATCGGTCTGATTGCGCACCATTTAGAAACCATTTATGAGCGCATCATTAACCGTCAGATGAG
CGCATCGACCGCATTGATTCAGATTATCCGTCTGGTTCAGGACAATATTGCGGACCGTATCCAGACCATCCGTGAACAGC
AGGTCGATTATCCGGCGCAAGAATCACTGGCGATTCTGGAAAATATTAGCGAACTGGCCCAAGGTCAACTGGTTGAAGCT
GAATCGCTGGCAGTGGCGGCTGAAGCAACCTCTAGCGCAGATGTACAACAGTCTGATGCATCTGCACTTGAGTTTGAACT
GGAACAGCCAGCACCTGCAGAAACAGCCTATACTGCGCCTGAAGATGAGCAGCCAGACACCAGCAGCGAACCGGTACTGG
AAGATGCACCGACCCTGGCTGAGCAAACCATCCCTACAGATGCGGTATCTACTACTGAAAATGACGGTGAAGACAATCTG
CATTCGATTGTGGAAGAAACCTTCCTGGAAGAAGCTGAAGAGCTGCTCGACACCACAGAAAGCCTGTTAAAGCAGTGGTT
TGACCATCGTAGTGACCGAAGCATTTTGCTGCAGTTACAACGTTCTGCGCACAGCCTGAAAGGCGGCGCGCGTATGGCCG
AAATCGAGCCGGTGGCCGTGATTGCCTATCAGCTGGAAAATACCTTTGAACAGTTCGCGGTGCATCAGTTTAATTCCAAT
GCCTATGATGCCTTGCTCAACACCACTGTGGCTTGGTTAAAAGAAGCCATCTTCCAGCGCGATTACAGCAATTTTGATAG
CCTGAAAGCCAGCCTGGAGTCGATTGAATACGTCAATGCGACGGCGCAGCTGCCAGAACGCTTCAATACCGCCGATCTGA
TGGCGCCAAGCAAAACCTTCGAATTTGTGCAGGGTGATGGTGCCGAGCCGCCATCCATGCAGGGCGAATGGAGCGAAACC
GCACAGCTGGATAACAGCAATGAGATGATCCGTATTTCGGCTGATCTGGTTGAGAAGATGATTGACCTGTCGGGTGAAAA
CGCGATTAACCGCTCGCGAATCGAGATGGAGCTGGGTCAGCTGGGCGGTACCCTGAATGAAATGGAACTGGCGATTAAAC
GTCTGGCCGATCAGTTACGCCGAATGGAAGGCGAGCTGGAAAGCCAGATTATTGCCAAACATGGTGATGAACATTCACGC
TATACCGACTTCGACCCGCTGGAGATGGACCAGTACTCCTCCTTGAACCAGCTGTCAAAATCGTTGGCGGAATCGGCGTC
GGACTTGGTGGACTTTAAGACCACGCTGGCGGACAAGATTCGTGATGCCGAAGGTCTGTTACTGCAACAGTCGCGGATTC
AGGCAGAAATTCAGGAAAGCCTGATGCGTACCCGTCTGGTACCGTTCTCGCGCATGTTGCCACGTTTACAGCGGATTGTG
CGTCAGACTTCATCGACCTTAAACCGTCCTGCCGAGCTGGTGGTACACAATACCGAAGGCGAGCTGGACCGGACCATTCT
GGAACGCCTGATTTCACCATTTGAACACATGCTGCGTAATGCGGTGGACCATGGCCTGGAAGATGCCGCTGTACGTAAAC
AGGCAGCGAAGCCGGAAGTGGGCCAGATTGAGCTGAACATTGGCCGTCAGGGCACTGATGTACTGATTAGCTTTACCGAT
GATGGTAAGGGGATTGATGAAACCAAAATTCACGCCAAAGCCCTGAGCCTTGGCCTGATTCAGCCAGAGCAGCAGCTGGA
CAAGAAAGAAATCCTGCAGCTGATTTTCCATCCGGGCTTTAGTACCGCACAAGCCGTGACCCAAATTTCGGGTCGTGGCG
TCGGTCTGGACGTGGTGCAAAGCGAAATTAAAGCGCTGGGCGGCCATGTTGAGGTCGATTCTGAACTCGGTAAAGGCACT
ACTTTCAGTATTCGCGTACCGACCACAGTGGCGGTATCCGATGCCTTGATGGTAAAAGTTGGCGATCAGCAGTTCGCAAT
TCCATTGGCGCAAATTGACCGTATTGTACGAATTTCACCTTCTGCGCTGGAAAGTTACTTCAGCAGCAAAGATGACTACT
TCAAGATTGATCAGCAAAACTATAAGTTGCGGTATCTGTCCGAGTTTGTTGCCAATCAGCCATTGCCGCGTTTAAGCAAT
ATCGCGCATTCATTGCCGGTGCTGCTGATTAAAGGCAATACCGGTCAGACCATTGCCTTACTGGTCGATCAGCTGATTGG
TTCGCGTGGCCAGATTGTGATGAAACCGATTGGGCAGCAGTTCTCCAGCGTGGGCTCGATTGCCGGCGCGACCATTCTCG
GTGATGGTCAGGTCTGTCTGATTCTGGATGGTCAGAATATTGCCCGTCAGATTCAGGCCACCCAGCGCATCAAGCATGTG
ATGGAGCCGCGTGAAGTACAGCGTCGTGATACCCGTCATCTGGTAATGATTGTGGATGACTCGGTGACCGTACGTAAGGT
CACGTCACGTCTGCTCGAGCGTCAGGGCTTTGATGTGGTCACAGCCAAAGACGGTGTCGATGCGATTGAGCAGCTTGAAA
ATGTTAAACCGGATCTGATGCTGCTGGATATTGAAATGCCGCGTATGGACGGCTTTGAGGTGACCACCCTGGTACGCCGC
CATGACATCCATCGTGACTTGCCAATTATCATGATTACCTCGCGTACCGGTGAAAAACACCGCGAACGTGCCTTTAGCTT
GGGGGTAACGCACTATATGGGTAAACCGTTCCAGGAAGCAGAATTGCTTGCCAATATTGAAAACATTTTGCATAGCAGTG
AGGCTAAAGCATGA

Domains

Predicted by InterproScan.

CheW-like domain (CheW)

(1215-1350)

Response regulator receiver domain (Response_reg)

(1375-1486)

Hpt domain (Hpt)

(726-790)

Hpt domain (Hpt)

(25-110)

Hpt domain (Hpt)

(204-284)

Hpt domain (Hpt)

(512-598)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1073-1208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.129

100

0.622

Multiple sequence alignment