Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   G0029_RS03685 Genome accession   NZ_CP048670
Coordinates   785389..789906 (+) Length   1505 a.a.
NCBI ID   WP_180107353.1    Uniprot ID   A0A7S7AKC9
Organism   Acinetobacter sp. YH12138 strain YH12138_T     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 780389..794906
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G0029_RS03660 (G0029_03660) - 780845..781438 (-) 594 WP_373685909.1 hypothetical protein -
  G0029_RS03665 (G0029_03665) pilG 781782..782165 (+) 384 WP_078191060.1 twitching motility response regulator PilG Regulator
  G0029_RS03670 (G0029_03670) - 782195..782563 (+) 369 WP_078191059.1 response regulator -
  G0029_RS03675 (G0029_03675) - 782570..783106 (+) 537 WP_078191058.1 chemotaxis protein CheW -
  G0029_RS03680 (G0029_03680) - 783151..785226 (+) 2076 WP_078192256.1 methyl-accepting chemotaxis protein -
  G0029_RS03685 (G0029_03685) chpA 785389..789906 (+) 4518 WP_180107353.1 Hpt domain-containing protein Regulator
  G0029_RS03690 (G0029_03690) - 789910..790377 (+) 468 WP_078192254.1 hypothetical protein -
  G0029_RS03695 (G0029_03695) dapE 790447..791580 (-) 1134 WP_180023170.1 succinyl-diaminopimelate desuccinylase -
  G0029_RS03700 (G0029_03700) - 791703..791852 (-) 150 WP_078191053.1 entericidin A/B family lipoprotein -
  G0029_RS03705 (G0029_03705) - 792017..792880 (-) 864 WP_180107354.1 DUF1853 family protein -
  G0029_RS03710 (G0029_03710) - 792969..793403 (+) 435 WP_180004991.1 YbaN family protein -
  G0029_RS03715 (G0029_03715) elsL 793396..793890 (+) 495 WP_180078155.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence

Protein


Download         Length: 1505 a.a.        Molecular weight: 167984.19 Da        Isoelectric Point: 4.3584

>NTDB_id=422191 G0029_RS03685 WP_180107353.1 785389..789906(+) (chpA) [Acinetobacter sp. YH12138 strain YH12138_T]
MKEILKNLVETTTLPEDSYLDQDAEILEIFVEEIEEIFEELAGLFTTWLENPQDKDTLTTIRRHFHTLKGSGRMVGAKSA
GETAWAVEDTLNRVIAGSVQLTPTVQKFAQTVLNVYQYKLYPRFKNVAELDVDLRPLVLMGQQLQQNISLEPALEELLKL
ADQLKSEDGVTGLELTDVEATAPVEVLESTIDVVVESEPAPEQVDADASLVEETVSIFIEEAEEHLQTIDQFLQSDDSKS
QDYNGLIRALHTLRGSSSMAQIEEIFEASSKVENLFKTLLQDEIVSSSKETALLIQYAEFVRDYLHVLRSGDKTNLASIY
ETFKAAWDDYGFASQDQLAPEDNPQGLVSKLIELNIDQLLDAEFEFDKRALAEFPDYIQQLSQQALELIKHTDNRASVGI
HDFTTQLRAAYQSLVEKPELLHADYGYELFAQAHQEFIHLFDTLAAGQRVVLSEAVQRFLNELTAFVQQDIEAVAATTTP
EAHVVAEPVATVEDKAAVPNTTAVDFAQLSQRIQLDHQQMQAADANNDFDEDLLGIFIEEAEELLVGIDQDLSTWTRDQT
NTSALNNLMRYLHTLKGGANMIAASHVGLISHELESIYERIIRQQILITPALIQIIRLVQDDISDRIQTIRDQGIDYPAN
NVIDILKNIQSIVAGERSEAVALASTDSILAETEQAAVEQDVSVLEPMDVAVDTAEAVVEAQTTAHTESAVEHLEHAVAE
HVEHPDDDLRSVMEETFLEESEEILEQAVQLLNQWTEQRSDRNVLLQLQRAAHSIKGGARMVENEPVAAIAYQLETTFEH
FAVHHFNSNAYDGLIKTTLAWLKEAIFNHDYSNFDSIKLSLESIQYVDVTVQLPNRVAELEQGIVSKGFEFIQGDGVEPP
SMLGEWSEANSSDNSNEMIRISADLVEKMIDLSGENSINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMDGELESQII
AKHGSENSRYADFDPLEMDQYSSINQLSKSLAESASDLVDFKSTLAEKIRDAEGLLLQQSRIQSEIQESLMRTRLVPFDR
LLPRLQRIVRQTSSTLNRPAELIVQNTEGELDRTILERLVTPFEHMLRNAVDHGLEDTADRLALKKPEVGSIVLNISRQG
TDVLVSFSDDGKGIDETKIKDKALKLGLIKADQFLDKQEILQLIFHPGFSTAQSVTQISGRGVGLDVVQSEIKALGGHVS
VESELGKGTTFTIRVPTTVAVSDALMVKAGDQQYAISLAQIERIVRIAPTALETYFNSKDDMFKIDNTNYKLRYLSEFVG
NQPIPRLNNVGHSLPVLLIKGNSGQTIALLVDQLVGSRSQIVVKPIGQQFTSVAAIAGATILGDGHVCLILDGQNIARQI
QTTQRVKHSAEQRDLGRQANARRLVMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAIEQLENVRPDLMLLDIEMPRMD
GFEVTNLVRHHDIHRELPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIEALIAEKQG

Nucleotide


Download         Length: 4518 bp        

>NTDB_id=422191 G0029_RS03685 WP_180107353.1 785389..789906(+) (chpA) [Acinetobacter sp. YH12138 strain YH12138_T]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACAACTACGCTTCCTGAAGATAGTTATCTTGATCAAGATGCAGAAATTTT
AGAGATTTTTGTTGAAGAAATAGAAGAAATCTTTGAAGAACTGGCGGGTTTATTTACAACTTGGTTGGAAAATCCACAAG
ATAAAGACACTTTAACGACGATTCGTCGTCATTTCCATACCCTGAAAGGTTCAGGTCGTATGGTCGGGGCAAAATCGGCG
GGTGAAACTGCATGGGCAGTTGAAGATACACTGAATCGTGTCATTGCGGGTTCAGTACAGTTAACGCCGACCGTTCAAAA
GTTTGCACAAACAGTTTTAAATGTTTATCAATATAAGCTCTATCCACGGTTTAAAAATGTTGCCGAATTGGATGTAGACT
TACGTCCATTGGTTTTAATGGGGCAACAATTACAACAAAATATTAGCCTTGAGCCTGCACTCGAAGAATTATTAAAACTG
GCAGATCAATTAAAATCTGAAGATGGTGTCACTGGTTTAGAACTGACTGATGTTGAAGCTACAGCACCTGTAGAAGTGCT
TGAAAGTACGATTGATGTGGTTGTTGAATCAGAACCTGCTCCTGAACAAGTGGATGCAGATGCATCACTGGTCGAAGAGA
CTGTGAGCATTTTTATTGAAGAAGCTGAAGAACATCTACAAACGATTGATCAGTTCCTCCAATCAGATGACAGTAAATCA
CAAGACTATAATGGCTTGATTCGCGCGCTACACACCTTACGTGGTAGTTCGTCAATGGCGCAAATCGAAGAGATTTTTGA
AGCCAGTTCAAAAGTTGAAAACTTATTCAAAACCTTATTACAAGACGAAATCGTATCGAGCTCGAAAGAAACTGCTTTAT
TGATTCAATATGCTGAATTTGTTCGTGATTATTTGCACGTGCTGCGTTCAGGGGATAAGACAAATCTTGCATCTATTTAT
GAAACCTTCAAAGCTGCTTGGGATGATTATGGTTTTGCTAGCCAAGATCAATTGGCGCCTGAAGATAATCCGCAAGGTTT
GGTTTCTAAGCTAATCGAATTAAATATTGATCAGTTATTGGATGCTGAATTTGAGTTTGATAAACGTGCCCTTGCTGAAT
TCCCAGACTATATTCAACAGCTCAGTCAACAAGCTTTAGAGTTGATCAAACATACGGATAATCGTGCGTCTGTTGGAATC
CATGATTTCACAACTCAACTGCGTGCAGCATATCAGTCTTTAGTTGAAAAGCCTGAATTACTCCATGCTGATTATGGCTA
TGAGTTATTTGCGCAAGCACATCAAGAGTTTATTCACTTATTTGACACTTTAGCTGCAGGTCAGCGTGTAGTGTTAAGTG
AAGCGGTTCAACGTTTCTTAAATGAGCTGACTGCATTTGTTCAACAAGACATTGAAGCAGTTGCAGCGACGACAACACCA
GAAGCCCATGTAGTTGCTGAACCTGTTGCCACTGTAGAAGATAAAGCCGCTGTTCCAAATACAACAGCAGTAGACTTTGC
ACAATTAAGTCAGCGTATTCAACTTGATCATCAACAGATGCAAGCGGCGGATGCGAATAATGACTTTGATGAAGATCTTT
TAGGGATCTTTATTGAAGAGGCTGAAGAATTATTGGTGGGGATTGACCAAGACCTCAGTACTTGGACGCGCGATCAAACC
AATACTTCAGCTTTGAATAATTTAATGCGTTATTTGCATACCCTAAAAGGTGGTGCAAATATGATTGCCGCGTCTCATGT
GGGTTTAATTTCGCATGAATTGGAATCGATTTATGAGCGTATTATTCGTCAGCAAATTTTGATTACCCCTGCGTTAATTC
AAATTATTCGTTTGGTGCAGGATGATATTTCAGATCGTATTCAAACCATTCGTGACCAAGGGATCGACTACCCTGCGAAT
AATGTGATCGATATTCTCAAGAATATTCAGTCAATTGTGGCAGGAGAGCGTTCAGAAGCTGTTGCATTGGCTTCGACCGA
TTCTATTTTAGCTGAAACTGAACAAGCAGCAGTAGAACAAGATGTATCGGTGTTAGAGCCGATGGATGTTGCTGTAGACA
CAGCAGAAGCAGTGGTTGAAGCTCAAACGACTGCTCACACTGAGTCCGCTGTTGAACATCTTGAACATGCGGTTGCTGAA
CATGTTGAGCATCCAGATGATGATCTACGTTCGGTCATGGAAGAAACCTTCCTTGAAGAGTCTGAGGAAATTCTTGAACA
AGCCGTTCAATTATTAAATCAATGGACTGAACAACGTAGTGACCGTAACGTATTGCTTCAATTACAACGTGCTGCCCACA
GTATTAAGGGTGGTGCGCGTATGGTTGAAAATGAACCTGTTGCCGCAATTGCGTATCAACTTGAGACGACGTTTGAGCAT
TTTGCGGTTCATCATTTCAACTCAAATGCATATGACGGCTTAATCAAAACGACGTTGGCATGGTTAAAAGAAGCAATCTT
CAACCATGACTATAGTAATTTTGACAGCATCAAATTGAGCTTAGAATCCATTCAGTATGTGGATGTTACGGTTCAATTGC
CAAACCGTGTTGCAGAATTAGAACAAGGTATTGTCAGTAAAGGCTTTGAATTTATTCAAGGTGATGGTGTTGAACCTCCA
TCTATGTTGGGTGAATGGTCTGAAGCTAATTCTTCTGATAACAGTAATGAGATGATTCGTATCTCGGCTGATCTCGTCGA
GAAGATGATTGACTTATCAGGCGAAAACTCGATTAACCGTTCACGTATTGAGATGGACTTAGGTCAGCTAGGCAATACTT
TGAATGAAATGGAGTTAGCAATTAAGCGACTTGCTGACCAGTTACGTCGAATGGATGGTGAGCTTGAGTCACAAATTATT
GCCAAACATGGTTCTGAAAATTCACGCTATGCGGATTTCGACCCATTGGAGATGGACCAATATTCATCGATTAACCAATT
GTCAAAATCTCTAGCCGAATCTGCGTCGGATTTGGTTGACTTCAAGAGTACTTTGGCAGAAAAAATCCGTGATGCGGAAG
GTTTGTTATTACAACAATCACGTATTCAGTCAGAAATTCAAGAAAGTCTGATGCGTACCCGTTTGGTGCCATTTGATCGT
TTGTTACCACGTTTACAACGTATTGTGCGTCAAACCTCTTCGACCTTGAACCGTCCTGCAGAATTGATTGTTCAAAATAC
AGAAGGTGAATTGGACCGTACGATCTTAGAGCGTTTGGTGACACCATTTGAACATATGCTGCGTAATGCGGTCGACCATG
GTTTAGAAGATACTGCTGACCGTTTGGCTTTAAAAAAGCCAGAAGTAGGTAGCATCGTCTTGAACATTAGTCGTCAGGGT
ACTGATGTACTGGTGTCTTTCAGTGATGATGGTAAAGGGATTGATGAAACCAAAATTAAAGACAAAGCCTTAAAACTTGG
TTTAATCAAAGCGGATCAGTTCCTCGATAAACAAGAAATCTTGCAATTGATCTTCCATCCAGGTTTCTCAACGGCACAAT
CGGTAACGCAAATTTCGGGTCGTGGTGTTGGTCTGGATGTGGTGCAAAGTGAAATTAAAGCCTTGGGTGGTCATGTTTCC
GTTGAGTCTGAGTTAGGTAAAGGGACGACCTTTACCATTCGTGTACCAACCACAGTAGCGGTCAGCGATGCCTTGATGGT
GAAAGCGGGCGATCAGCAATATGCGATTTCATTAGCGCAAATTGAACGTATTGTCCGTATTGCACCTACGGCACTCGAAA
CTTACTTCAATAGTAAGGATGACATGTTTAAAATTGACAACACCAATTACAAACTACGTTATCTATCAGAGTTTGTGGGT
AATCAGCCAATTCCACGTTTAAATAATGTCGGCCATTCATTGCCTGTACTACTAATTAAAGGCAACAGTGGTCAAACCAT
TGCTTTATTGGTCGATCAGCTGGTGGGTTCACGTTCTCAAATCGTGGTGAAACCAATTGGTCAACAATTTACCAGTGTAG
CCGCGATTGCAGGTGCCACGATTCTAGGTGATGGTCATGTATGTTTGATTTTGGATGGGCAAAATATTGCACGTCAAATT
CAAACTACGCAGCGTGTTAAACATTCAGCTGAACAGCGTGATTTGGGCCGTCAAGCCAATGCGCGTCGTTTAGTGATGAT
TGTCGATGACTCGGTAACTGTACGTAAAGTGACTTCACGCTTACTTGAACGTCAAGGTTATGACATTGTGACAGCGAAAG
ATGGTGTGGATGCAATTGAGCAGCTTGAAAATGTCCGTCCAGACTTGATGCTACTCGATATTGAAATGCCACGTATGGAT
GGTTTCGAAGTGACAAACTTAGTTCGTCACCATGACATTCACCGTGAGCTGCCAATCATTATGATTACATCACGTACAGG
TGAAAAACATCGTGAGCGTGCATTTAGCTTAGGTGTGACTCACTATATGGGTAAACCATTCCAAGAAGCTGAATTGCTTG
CCAATATTGAAGCTTTAATTGCAGAAAAGCAGGGGTAA

Domains

Predicted by InterproScan.

CheW-like domain (CheW)

(1224-1359)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1082-1217)

Response regulator receiver domain (Response_reg)

(1385-1496)

Hpt domain (Hpt)

(214-284)

Hpt domain (Hpt)

(735-799)

Hpt domain (Hpt)

(25-106)

Hpt domain (Hpt)

(532-620)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.75

100

0.614

Multiple sequence alignment