Detailed information NTG0422168

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: G0028_RS07310
• Genome accession: NZ_CP048659
• Coordinates: 1520937..1521581 (+)
• Length: 214 a.a.
• NCBI ID: WP_130072596.1
• Uniprot ID: -
• Organism: Acinetobacter piscicola strain YH12207_T
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1515937..1526581

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G0028_RS07275 (G0028_07265)	kdsB	1516268..1517029 (+)	762	WP_180045344.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
G0028_RS07280 (G0028_07270)	-	1517048..1518028 (+)	981	WP_180045384.1	DNA polymerase III subunit delta'	-
G0028_RS07285 (G0028_07275)	-	1518044..1518385 (+)	342	WP_130073031.1	PilZ domain-containing protein	-
G0028_RS07290 (G0028_07280)	-	1518417..1519190 (+)	774	WP_180045345.1	TatD family hydrolase	-
G0028_RS07295 (G0028_07285)	-	1519239..1519853 (+)	615	WP_130072600.1	TetR/AcrR family transcriptional regulator	-
G0028_RS07300 (G0028_07290)	-	1519857..1520423 (+)	567	WP_180045346.1	type II secretion system protein	-
G0028_RS07305 (G0028_07295)	xcpV	1520533..1520922 (+)	390	WP_180045385.1	type II secretion system minor pseudopilin GspI	Machinery gene
G0028_RS07310 (G0028_07300)	xcpW	1520937..1521581 (+)	645	WP_130072596.1	type II secretion system minor pseudopilin GspJ	Machinery gene
G0028_RS07315 (G0028_07305)	gspK	1521594..1522541 (+)	948	WP_130072594.1	type II secretion system minor pseudopilin GspK	-
G0028_RS07320 (G0028_07310)	-	1522748..1523344 (+)	597	WP_130072591.1	6-pyruvoyl trahydropterin synthase family protein	-
G0028_RS07325 (G0028_07315)	ung	1523431..1524144 (+)	714	WP_130072588.1	uracil-DNA glycosylase	-
G0028_RS07330 (G0028_07320)	-	1524141..1525265 (+)	1125	WP_130072585.1	enoyl-CoA hydratase/isomerase family protein	-
G0028_RS07335 (G0028_07325)	tadA	1525274..1525795 (+)	522	WP_180045347.1	tRNA adenosine(34) deaminase TadA	-
G0028_RS07340 (G0028_07330)	-	1525852..1526286 (+)	435	WP_174492892.1	SRPBCC family protein	-

Sequence

Protein

• Length: 214 a.a.
• Molecular weight: 24413.82 Da
• Isoelectric Point: 5.0657

>NTDB_id=422168 G0028_RS07310 WP_130072596.1 1520937..1521581(+) (xcpW) [Acinetobacter piscicola strain YH12207_T]
MSNQTKTQGFTLIELMVAIAIFAVLAALGWKIFDYLNKVKERNAMHEQNLGQLQEAYQQMQRDTLQIIPVTASMGQQILP
ALQLDQQKLSFSKTGMTDPLKQGLASFERVEYVYSAQDKKLYRLKYSNLNLSAAAQPLSSVLLNDVDQYQVSTLNPNEGE
RWPDENAFNERQLPRGIKIKVMIRDVEYEWIFSLLDTEFLREQTSASTPVNNGS

Nucleotide

• Length: 645 bp

>NTDB_id=422168 G0028_RS07310 WP_130072596.1 1520937..1521581(+) (xcpW) [Acinetobacter piscicola strain YH12207_T]
ATGTCTAATCAAACAAAAACACAAGGATTTACATTGATTGAACTGATGGTTGCCATTGCAATCTTTGCTGTTTTGGCGGC
GTTGGGTTGGAAAATTTTTGATTATCTAAATAAAGTCAAAGAACGAAATGCGATGCATGAGCAAAATTTGGGACAACTAC
AAGAAGCATATCAGCAAATGCAACGCGATACCTTGCAAATTATTCCTGTAACAGCGAGTATGGGACAACAAATATTGCCT
GCATTGCAACTCGATCAGCAGAAATTGAGTTTTAGTAAAACAGGGATGACTGATCCTTTGAAGCAGGGACTTGCCAGTTT
TGAGCGCGTTGAATATGTTTATAGCGCACAAGATAAAAAATTATATCGTTTGAAATATAGCAATTTGAATTTATCTGCTG
CTGCACAGCCTTTATCGAGTGTACTGCTCAACGATGTCGATCAATATCAGGTCAGTACGCTAAACCCGAACGAAGGTGAG
CGGTGGCCTGATGAAAATGCCTTTAATGAGCGTCAATTACCACGAGGCATTAAAATTAAAGTGATGATCCGTGATGTTGA
ATATGAGTGGATTTTTAGTTTATTGGATACTGAGTTTTTGCGTGAGCAAACGAGTGCGAGTACACCTGTCAATAATGGAT
CATGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-28)

• Type II secretion system (T2SS), protein J (T2SSJ) (60-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	61.538	91.121	0.561