Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   G0027_RS12750 Genome accession   NZ_CP048654
Coordinates   2652303..2656799 (+) Length   1498 a.a.
NCBI ID   WP_127798594.1    Uniprot ID   -
Organism   Acinetobacter indicus strain C15_T     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2647303..2661799
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G0027_RS12725 (G0027_12705) - 2647797..2648438 (-) 642 WP_180192002.1 hypothetical protein -
  G0027_RS12730 (G0027_12710) pilG 2648720..2649103 (+) 384 WP_005179541.1 twitching motility response regulator PilG Regulator
  G0027_RS12735 (G0027_12715) - 2649120..2649488 (+) 369 WP_005179539.1 PleD family two-component system response regulator -
  G0027_RS12740 (G0027_12720) - 2649492..2650028 (+) 537 WP_005179538.1 chemotaxis protein CheW -
  G0027_RS12745 (G0027_12725) - 2650074..2652146 (+) 2073 WP_127798596.1 methyl-accepting chemotaxis protein -
  G0027_RS12750 (G0027_12730) chpA 2652303..2656799 (+) 4497 WP_127798594.1 Hpt domain-containing protein Regulator
  G0027_RS12755 (G0027_12735) - 2656796..2657257 (+) 462 WP_075167114.1 hypothetical protein -
  G0027_RS12760 (G0027_12740) dapE 2657327..2658460 (-) 1134 WP_005179534.1 succinyl-diaminopimelate desuccinylase -
  G0027_RS12765 (G0027_12745) - 2658587..2658733 (-) 147 WP_005179532.1 entericidin A/B family lipoprotein -
  G0027_RS12770 (G0027_12750) - 2658834..2659736 (-) 903 WP_005179530.1 DUF1853 family protein -
  G0027_RS12775 (G0027_12755) - 2659827..2660216 (+) 390 WP_075167111.1 YbaN family protein -
  G0027_RS12780 (G0027_12760) elsL 2660213..2660743 (+) 531 WP_104488696.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1498 a.a.        Molecular weight: 167038.49 Da        Isoelectric Point: 4.2984

>NTDB_id=422140 G0027_RS12750 WP_127798594.1 2652303..2656799(+) (chpA) [Acinetobacter indicus strain C15_T]
MKEILKNLVETTALPEDSYLDQDAEILEIFVEEIEEIFVELKDLLAQWATQPNDQETLTTIRRHFHTLKGSGRMVGAKSA
GELAWTVEDTLNRVIYGSLTLSAQVQQFATAVANVFEYKLYPSFKHAQPMALDLRPLVLLGQQLQQNLSPEPALEELLQL
ASSLRSSDSITGLEFDTASTDEQVAADTELAVADSVEEDPLAAETLAIFIEEAEEHLLTVDRFLAHDELKTQDYNGLIRA
LHTLRGSSSMAHIEQIFDASSKVENLFKTLLQDEIESTSKETALLLQYAEFVRDYLHLLPQNDSAGMDRIYQTFNTAWQN
YGFSLEDVDESVNPQGLVSKLIELNIDQLLDAEFEFDQRAQAEYPEYIQTLSHQAKLLVERTDNRASQGIHDFTQELQLA
YAALLDKPSLLHSDYAFELFGQAHQEFIHLFDTLAAGQRVSLSEDAQQIINNLSAFVQQDIEALSSETGTTEAVTETAET
GAGLNLAVLSQRLEADRQYMDSAEANKDFDPDLLDIFLEEAEELLTGIDQDVNSWSQDPSNTAALNNLMRHLHTLKGGAN
MIAASHIGLIAHHLETIYERIINRQMNASTALIQIIRLVQDNIADRIQTIREQQVDYPAQESLAILENISELAQGQLVEA
ESLAVAAEATSSADVQQSDAAALEFELEQPAPAETAYAAPEDEQQPDISSEPVLEDAPTLAEQTIPTDAVSTTENDGEDN
LHSIVEETFLEEAEELLDTTESLLKQWFDHRSDRSILLQLQRAAHSLKGGARMAEIEPVAVIAYQLENTFEQFAVHQFNS
NAYDALLNTTVVWLKEAIFQRDYSNFDSLKASLESIEYVNATAQLPERFNATDLLAPSKTFEFVQGDGAEPPSMQGEWSE
TAQLDNSNEMIRISADLVEKMIDLSGENAINRSRIEMELGQLGGTLNEMELAIKRLADQLRRMEGELESQIIAKHGDEHS
RYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLADKIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRMLPRLQRI
VRQTSSTLNRPAELVVHNTEGELDRTILERLISPFEHMLRNAVDHGLEDAAVRKQAAKPEVGQIELNIGRQGTDVLISFT
DDGKGIDETKIHAKALSLGLIQPEQQLDKKEILQLIFHPGFSTAQAVTQISGRGVGLDVVQSEIKALGGHVEVDSELGKG
TTFSIRVPTTVAVSDALMVKVGDQQFAIPLAQIDRIVRISPSALESYFSSKDDYFKIDQQNYKLRYLSEFVANQPLPRLS
NIAHSLPVLLIKGNTGQTIALLVDQLIGSRGQIVMKPIGQQFSSVGSIAGATILGDGQVCLILDGQNIARQIQATQRIKH
VMEPREVQRRDTRRLVMIVDDSVTVRKVTSRLLERQGFDVVTAKDGVDAIEQLENVKPDLMLLDIEMPRMDGFEVTNLVR
HHDIHRDLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIENILHSSEAKA

Nucleotide


Download         Length: 4497 bp        

>NTDB_id=422140 G0027_RS12750 WP_127798594.1 2652303..2656799(+) (chpA) [Acinetobacter indicus strain C15_T]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACGACTGCGCTTCCTGAAGATAGTTATCTTGATCAAGATGCAGAAATTCT
AGAAATTTTTGTTGAAGAAATTGAAGAAATCTTCGTTGAGCTAAAAGACCTGTTGGCTCAATGGGCCACGCAGCCTAACG
ATCAGGAAACGCTAACCACCATTCGCCGTCATTTTCATACCTTAAAAGGTTCTGGACGCATGGTTGGTGCCAAGTCGGCA
GGAGAGCTGGCCTGGACGGTTGAAGATACCTTAAACCGGGTCATTTACGGTAGCCTGACCCTGTCAGCGCAGGTGCAGCA
GTTTGCAACCGCGGTGGCGAACGTCTTTGAATACAAACTTTATCCAAGCTTTAAACATGCTCAGCCGATGGCACTAGACC
TGCGTCCATTGGTGCTATTAGGACAACAATTACAACAAAATTTAAGTCCTGAACCGGCTTTAGAAGAGCTGTTACAACTG
GCAAGCAGCCTAAGGTCCAGCGACAGTATCACCGGTCTGGAGTTTGATACAGCAAGTACTGATGAGCAGGTTGCTGCAGA
CACCGAGCTGGCTGTGGCTGATAGTGTTGAAGAAGATCCGCTAGCAGCTGAAACACTGGCCATCTTTATTGAAGAAGCGG
AAGAACACCTGTTAACAGTGGATCGCTTCCTGGCACATGATGAGCTGAAAACCCAAGATTACAATGGCCTGATTCGTGCC
CTGCATACCTTGCGCGGCAGTTCATCCATGGCACACATCGAGCAGATTTTTGATGCCAGCTCCAAGGTCGAAAACCTGTT
CAAGACCCTGTTACAGGATGAAATTGAATCGACCTCTAAAGAAACCGCACTGTTGCTGCAATATGCTGAATTTGTGCGGG
ATTATCTGCATCTGTTGCCGCAGAATGACAGTGCCGGCATGGACCGGATTTATCAGACTTTCAATACTGCATGGCAGAAC
TATGGCTTTAGCCTGGAAGATGTTGATGAATCAGTGAATCCGCAAGGTCTGGTATCCAAGCTGATTGAACTGAATATTGA
TCAGTTGCTCGATGCTGAGTTCGAATTTGACCAGCGCGCGCAGGCTGAATATCCGGAATATATCCAGACCCTGAGCCATC
AGGCGAAGCTGCTGGTAGAGCGTACCGATAACCGCGCCTCTCAGGGTATTCATGATTTTACCCAGGAATTACAACTGGCC
TATGCGGCCTTGCTGGATAAGCCAAGCTTGCTGCATAGCGATTATGCCTTTGAATTATTTGGACAGGCGCATCAGGAATT
TATCCATCTGTTTGATACCCTGGCTGCCGGACAACGCGTCAGCTTAAGCGAAGACGCCCAGCAGATCATCAATAACCTGA
GTGCCTTTGTACAGCAGGATATTGAAGCGCTAAGCTCAGAAACTGGCACCACAGAAGCTGTCACCGAAACGGCTGAAACC
GGTGCAGGGCTGAATCTGGCCGTATTGTCACAGCGTCTGGAAGCTGACCGTCAATACATGGATAGCGCTGAGGCCAATAA
GGACTTTGATCCAGATCTGCTGGACATTTTCCTGGAAGAGGCCGAAGAGTTACTTACGGGTATTGACCAGGATGTTAACA
GCTGGAGTCAGGACCCGAGCAATACTGCTGCGCTGAACAATCTGATGCGCCATTTGCACACCTTAAAAGGTGGCGCCAAC
ATGATTGCAGCCAGCCATATCGGTCTGATTGCGCACCATTTAGAAACCATTTATGAGCGCATCATTAACCGTCAAATGAA
TGCATCAACCGCACTGATCCAGATTATCCGTCTGGTTCAGGACAATATTGCGGACCGTATCCAGACCATCCGTGAACAGC
AAGTCGATTATCCGGCGCAAGAATCACTGGCGATTCTGGAAAATATTAGCGAACTGGCCCAGGGTCAACTGGTTGAAGCT
GAATCGCTGGCAGTGGCGGCTGAAGCGACCTCTAGCGCAGATGTACAACAGTCTGATGCAGCTGCACTTGAGTTTGAACT
GGAACAGCCAGCACCTGCAGAAACAGCCTATGCTGCGCCTGAAGATGAGCAGCAGCCAGATATTAGCAGCGAACCGGTAC
TGGAAGATGCACCGACTCTGGCCGAGCAAACCATCCCTACAGACGCGGTATCTACTACTGAAAATGACGGTGAAGACAAT
CTGCATTCGATTGTGGAAGAAACCTTCCTGGAAGAAGCCGAGGAACTGCTCGACACCACAGAAAGCCTGTTAAAGCAGTG
GTTTGACCATCGTAGTGACCGAAGTATTTTGCTGCAGTTACAACGTGCTGCGCACAGTCTAAAAGGCGGCGCGCGTATGG
CTGAAATCGAGCCGGTGGCCGTGATTGCTTATCAGCTGGAAAATACCTTTGAACAGTTTGCGGTGCATCAGTTTAATTCC
AATGCTTATGATGCCTTGCTCAACACCACTGTGGTCTGGTTAAAAGAAGCCATCTTCCAGCGTGATTACAGCAATTTTGA
CAGCCTGAAAGCTAGCCTGGAGTCGATTGAATACGTCAATGCGACGGCACAGCTGCCAGAACGCTTTAATGCTACCGATT
TGCTGGCACCAAGCAAAACCTTCGAATTTGTACAGGGTGATGGTGCCGAGCCGCCATCCATGCAGGGCGAATGGAGCGAA
ACCGCACAGCTGGATAACAGCAATGAGATGATCCGTATTTCGGCTGATCTGGTTGAGAAGATGATTGACCTGTCGGGTGA
AAACGCGATTAACCGCTCGCGAATCGAGATGGAGCTGGGTCAGCTGGGCGGTACCCTGAATGAAATGGAATTGGCGATTA
AACGTCTGGCCGATCAGTTACGCCGAATGGAAGGCGAGCTGGAAAGCCAGATTATTGCCAAACATGGTGATGAACATTCA
CGCTATACCGACTTCGACCCGCTGGAGATGGACCAATATTCATCCTTGAACCAGCTGTCGAAATCGTTGGCGGAATCGGC
GTCGGACTTGGTGGACTTTAAGACCACGCTGGCGGACAAGATTCGTGATGCCGAAGGTCTGTTACTGCAACAATCGCGGA
TTCAGGCAGAAATTCAGGAAAGCCTGATGCGCACCCGTCTGGTACCGTTCTCGCGCATGTTGCCACGTTTACAGCGGATT
GTGCGTCAGACTTCATCGACCTTAAACCGTCCTGCCGAGCTGGTGGTACACAATACCGAAGGCGAGCTGGACCGGACCAT
TCTGGAACGCCTGATTTCACCATTTGAACACATGTTGCGTAATGCGGTGGACCATGGCCTGGAAGATGCCGCTGTACGTA
AACAGGCAGCGAAGCCGGAAGTGGGCCAGATTGAGCTGAACATCGGCCGTCAGGGTACCGATGTACTGATTAGCTTTACC
GATGATGGTAAGGGGATTGATGAAACCAAAATTCACGCCAAAGCCCTGAGCCTTGGCCTGATTCAGCCAGAGCAGCAGCT
GGACAAGAAAGAAATCCTGCAGCTGATTTTCCATCCGGGCTTTAGTACCGCACAAGCCGTGACCCAGATTTCAGGTCGTG
GCGTCGGTCTGGATGTGGTGCAAAGCGAAATTAAAGCGCTGGGCGGCCATGTCGAGGTCGATTCTGAACTCGGTAAAGGC
ACCACCTTCAGTATTCGCGTACCGACCACAGTGGCGGTATCCGATGCCCTGATGGTAAAAGTTGGCGATCAGCAGTTCGC
AATTCCATTGGCGCAAATTGACCGTATTGTACGAATTTCACCTTCTGCACTGGAAAGTTACTTCAGCAGCAAAGATGACT
ACTTCAAGATTGATCAGCAAAACTATAAGTTGCGCTATCTGTCCGAGTTTGTCGCTAATCAGCCATTGCCGCGTTTAAGC
AATATCGCGCATTCATTGCCGGTGCTGCTGATTAAAGGCAATACCGGTCAGACCATTGCCTTACTGGTCGATCAGCTGAT
TGGTTCGCGTGGCCAGATTGTGATGAAACCGATTGGGCAGCAGTTCTCCAGCGTGGGCTCGATTGCCGGCGCGACCATTC
TCGGTGATGGTCAGGTCTGTCTGATTCTGGATGGTCAGAATATTGCCCGTCAGATTCAGGCAACCCAGCGCATCAAGCAT
GTGATGGAACCGCGTGAAGTACAGCGTCGTGATACCCGTCGTCTGGTGATGATTGTGGATGACTCGGTGACCGTACGTAA
GGTCACGTCACGTCTGCTCGAACGTCAGGGCTTTGATGTGGTCACGGCCAAAGACGGTGTCGATGCGATTGAGCAGCTGG
AAAATGTTAAACCGGATCTGATGCTGCTGGATATTGAAATGCCGCGTATGGATGGCTTTGAGGTGACCAACCTGGTACGC
CACCATGACATCCATCGTGACTTGCCAATTATCATGATTACCTCGCGTACCGGTGAAAAACACCGCGAACGTGCCTTTAG
CTTGGGGGTAACGCACTATATGGGTAAACCGTTCCAGGAAGCAGAATTGCTTGCCAATATTGAAAACATTTTGCATAGCA
GTGAGGCTAAAGCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.907

100

0.619


Multiple sequence alignment