Detailed information    

insolico Bioinformatically predicted

Overview


Name   hns   Type   Regulator
Locus tag   G0027_RS06745 Genome accession   NZ_CP048654
Coordinates   1411101..1411427 (-) Length   108 a.a.
NCBI ID   WP_075167809.1    Uniprot ID   A0A7S7AEC3
Organism   Acinetobacter indicus strain C15_T     
Function   repress the expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1406101..1416427
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G0027_RS06725 (G0027_06730) - 1406297..1407004 (-) 708 WP_127799622.1 FHA domain-containing protein -
  G0027_RS06730 (G0027_06735) gspD 1407071..1409320 (-) 2250 WP_005181664.1 type II secretion system secretin GspD -
  G0027_RS06735 (G0027_06740) - 1409361..1410197 (-) 837 WP_127799620.1 type II secretion system protein N -
  G0027_RS06740 (G0027_06745) gspN 1410197..1410937 (-) 741 WP_104473370.1 type II secretion system protein N -
  G0027_RS06745 (G0027_06750) hns 1411101..1411427 (-) 327 WP_075167809.1 H-NS family nucleoid-associated regulatory protein Regulator
  G0027_RS06750 (G0027_06755) - 1411573..1412001 (-) 429 WP_005181644.1 thioesterase family protein -
  G0027_RS06755 (G0027_06760) - 1412012..1413205 (-) 1194 WP_127799618.1 heme biosynthesis protein HemY -
  G0027_RS06760 (G0027_06765) - 1413208..1414053 (-) 846 WP_127799616.1 hypothetical protein -
  G0027_RS06765 (G0027_06770) - 1414050..1414829 (-) 780 WP_127799614.1 uroporphyrinogen-III synthase -
  G0027_RS06770 (G0027_06775) hemC 1414831..1415748 (-) 918 WP_034598116.1 hydroxymethylbilane synthase -

Sequence


Protein


Download         Length: 108 a.a.        Molecular weight: 12271.00 Da        Isoelectric Point: 8.4694

>NTDB_id=422119 G0027_RS06745 WP_075167809.1 1411101..1411427(-) (hns) [Acinetobacter indicus strain C15_T]
MMPDISNLSVEQLKRLQEEAEALIASKKDQAVEDAYNQILAIAENAGLSIEQILEFGASKRKKNVRKSVEPRYRNKTNAN
ETWTGRGKQPRWLVAELEKGAKLEDFLI

Nucleotide


Download         Length: 327 bp        

>NTDB_id=422119 G0027_RS06745 WP_075167809.1 1411101..1411427(-) (hns) [Acinetobacter indicus strain C15_T]
ATGATGCCCGATATTAGTAATTTGTCTGTAGAACAATTAAAGCGCTTGCAGGAAGAAGCGGAAGCATTAATTGCATCGAA
AAAGGACCAGGCAGTTGAAGATGCATATAATCAGATTTTGGCAATTGCTGAAAATGCGGGTTTAAGCATTGAACAGATTC
TTGAGTTTGGTGCGTCTAAACGTAAAAAGAATGTACGTAAATCGGTAGAGCCGCGTTATCGTAATAAAACCAATGCCAAT
GAAACCTGGACAGGTCGTGGTAAGCAACCGCGCTGGTTAGTGGCAGAACTGGAAAAAGGTGCCAAGCTTGAAGACTTCTT
GATCTAA

Domains


Predicted by InterproScan.

(12-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7S7AEC3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hns Acinetobacter baumannii strain A118

85.185

100

0.852


Multiple sequence alignment