Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   GXM18_RS04460 Genome accession   NZ_CP048626
Coordinates   929991..931826 (+) Length   611 a.a.
NCBI ID   WP_018594093.1    Uniprot ID   -
Organism   Blautia producta ATCC 27340 = DSM 2950 strain JCM 1471     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 924991..936826
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GXM18_RS04440 (GXM18_04440) - 925642..926748 (+) 1107 WP_207638199.1 AI-2E family transporter -
  GXM18_RS04445 (GXM18_04445) - 926977..927411 (+) 435 WP_018594090.1 MarR family winged helix-turn-helix transcriptional regulator -
  GXM18_RS04450 (GXM18_04450) - 927415..927996 (+) 582 WP_018594091.1 CDP-alcohol phosphatidyltransferase family protein -
  GXM18_RS04455 (GXM18_04455) rcrP 928235..929998 (+) 1764 WP_018594092.1 ABC transporter ATP-binding protein Regulator
  GXM18_RS04460 (GXM18_04460) rcrQ 929991..931826 (+) 1836 WP_018594093.1 ABC transporter ATP-binding protein Regulator
  GXM18_RS04465 (GXM18_04465) - 932501..932872 (+) 372 WP_182557217.1 MarR family winged helix-turn-helix transcriptional regulator -
  GXM18_RS04470 (GXM18_04470) - 932893..933648 (+) 756 WP_018594098.1 glycosyltransferase family 8 protein -
  GXM18_RS04475 (GXM18_04475) - 933904..935211 (-) 1308 WP_233456952.1 patatin-like phospholipase family protein -
  GXM18_RS04480 (GXM18_04480) - 935261..935563 (-) 303 WP_018594100.1 hypothetical protein -
  GXM18_RS04485 (GXM18_04485) - 935938..936123 (-) 186 WP_018594102.1 cysteine-rich KTR domain-containing protein -
  GXM18_RS04490 (GXM18_04490) - 936120..936590 (-) 471 WP_018594103.1 MarR family winged helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 611 a.a.        Molecular weight: 67804.04 Da        Isoelectric Point: 8.3625

>NTDB_id=421930 GXM18_RS04460 WP_018594093.1 929991..931826(+) (rcrQ) [Blautia producta ATCC 27340 = DSM 2950 strain JCM 1471]
MNNDKITENQAAPEMDVSDFSGLGGTVQKAKDTKKTVKALLSYSKKYIAIIIMAVTAAIAGTVIALVSPEKLKDMTNLIT
DGIMTSLDMSDIAKIGILLVVLYLLSTILNTIQGWIMATVTQRISQKMRTDISQKINRLPMWFYHKNTTGDILSRITNDV
DSLGQNLNNSLTTLVSSATMLAGSLIMMFKTNWIMTVTAIASVILGFLVMMLIMSKSQKHFDNQQKYLGKINGHIEETYT
GHTIVKAYNAEQQMYEPFKSINKKLNKSTYMAQFLSGLMMPVMTFVDNLGYVAVIVVGAALALKGHISFGVIVAFLVYVR
YFTQPLTQIAQLAQGLQMAVAAGERVFEFLDAEEMADESHKKIKPQTVTGHVEFRNVKFGYEGTDKIIIHNFSAEARPGQ
KIAIVGPTGAGKTTLVNLLMRFNEINSGDILIDGIPIRQMTREQVHSLFCMVLQDTWLFEGTIRENIVYNKENVTVEMLK
QACKAVGLHHFIRTLPKGYDTVINDKISLSAGQRQQITIARAMIDNAPMLILDEATSSIDTRTEALIQNAMDKLMQGRTS
FVIAHRLSTIKNADIILVLKDGDIIESGSHTELMEKGGFYAELYNSQFEVA

Nucleotide


Download         Length: 1836 bp        

>NTDB_id=421930 GXM18_RS04460 WP_018594093.1 929991..931826(+) (rcrQ) [Blautia producta ATCC 27340 = DSM 2950 strain JCM 1471]
ATGAATAATGATAAAATTACGGAAAACCAGGCTGCACCGGAGATGGACGTCTCTGATTTTTCCGGTTTGGGAGGAACCGT
CCAAAAGGCAAAGGATACCAAAAAAACAGTAAAGGCCCTGCTCTCCTATTCCAAAAAGTATATCGCCATCATCATTATGG
CAGTGACCGCTGCGATTGCAGGAACGGTCATCGCTCTGGTCAGTCCTGAAAAGCTCAAGGATATGACCAATCTCATAACC
GATGGCATCATGACAAGCCTTGATATGTCCGACATTGCCAAAATCGGGATTCTTCTGGTTGTGCTTTATCTGTTGAGTAC
AATCTTAAACACCATACAAGGATGGATCATGGCAACAGTCACCCAGAGGATTTCCCAGAAAATGAGAACCGATATCAGCC
AGAAAATCAACCGTCTGCCCATGTGGTTTTACCATAAAAACACCACCGGGGATATCCTTTCCCGTATCACCAATGATGTG
GACTCTCTGGGACAGAACCTGAATAACAGTCTGACTACCCTTGTGTCATCTGCCACTATGCTGGCCGGTTCCCTGATTAT
GATGTTCAAAACCAACTGGATTATGACTGTCACAGCCATTGCTTCAGTCATTCTTGGCTTTTTAGTAATGATGCTCATCA
TGAGTAAGTCCCAGAAGCATTTTGACAACCAGCAGAAATATCTTGGAAAAATTAATGGCCACATCGAAGAAACCTACACC
GGACATACCATTGTGAAAGCCTATAATGCTGAACAGCAGATGTATGAGCCATTCAAAAGTATTAATAAAAAACTGAACAA
GAGCACCTATATGGCTCAATTTCTCTCCGGGCTGATGATGCCCGTCATGACCTTTGTAGATAACCTGGGCTATGTGGCAG
TTATTGTGGTAGGCGCCGCTTTGGCGCTGAAAGGCCATATCTCCTTTGGAGTAATCGTGGCGTTTTTGGTGTATGTGCGT
TATTTTACCCAGCCACTCACACAGATTGCCCAGCTGGCACAGGGGCTGCAGATGGCGGTTGCCGCCGGTGAACGTGTCTT
TGAGTTTCTGGATGCAGAAGAAATGGCAGACGAAAGTCATAAGAAGATAAAGCCTCAGACCGTTACCGGACATGTGGAGT
TCAGGAACGTAAAATTTGGTTATGAGGGCACAGATAAGATTATCATCCATAATTTTTCTGCCGAAGCCAGGCCAGGTCAA
AAAATTGCCATTGTAGGTCCCACCGGTGCCGGAAAAACAACCCTGGTCAATCTGCTGATGCGTTTCAACGAAATAAACAG
TGGGGATATCCTGATTGACGGCATTCCAATCCGCCAGATGACAAGGGAGCAGGTCCATTCTCTCTTCTGCATGGTATTGC
AGGATACCTGGCTTTTTGAAGGAACCATCCGGGAAAACATTGTGTATAACAAGGAGAACGTGACCGTTGAAATGCTCAAA
CAGGCATGTAAGGCGGTAGGGCTTCACCACTTCATCCGGACCCTTCCAAAAGGATATGACACGGTGATTAATGATAAGAT
TAGCCTTTCCGCAGGCCAGCGTCAGCAGATTACCATTGCCCGTGCCATGATTGATAATGCCCCCATGCTGATCCTGGATG
AAGCCACAAGCTCCATTGATACCAGAACAGAAGCGCTGATTCAAAACGCCATGGATAAGCTGATGCAGGGACGTACCTCT
TTTGTCATCGCCCACCGGCTGTCCACCATCAAAAATGCAGATATTATCTTAGTGTTAAAAGACGGCGATATTATTGAAAG
CGGCAGTCATACGGAACTGATGGAAAAAGGCGGGTTTTATGCGGAACTTTACAACAGCCAGTTTGAGGTTGCTTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(390-537)

ABC transporter transmembrane region (ABC_membrane)

(51-326)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

53.966

94.926

0.512

Multiple sequence alignment