Detailed information NTG0421713

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: G3M67_RS04675
• Genome accession: NZ_CP048601
• Coordinates: 992432..993871 (-)
• Length: 479 a.a.
• NCBI ID: WP_163524863.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain GCT 27
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 987432..998871

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G3M67_RS04650 (G3M67_04650)	recG	988564..990435 (-)	1872	WP_163524857.1	ATP-dependent DNA helicase RecG	-
G3M67_RS04655 (G3M67_04655)	-	990517..990864 (+)	348	WP_000837049.1	hypothetical protein	-
G3M67_RS04660 (G3M67_04660)	-	990868..991503 (+)	636	WP_163524859.1	outer membrane protein	-
G3M67_RS04665 (G3M67_04665)	-	991500..992252 (-)	753	WP_163524861.1	exodeoxyribonuclease III	-
G3M67_RS04675 (G3M67_04675)	comH	992432..993871 (-)	1440	WP_163524863.1	competence protein	Machinery gene
G3M67_RS04680 (G3M67_04680)	dnaA	994100..995473 (-)	1374	WP_163524864.1	chromosomal replication initiator protein DnaA	-
G3M67_RS04685 (G3M67_04685)	-	995626..996168 (+)	543	WP_163524866.1	purine-nucleoside phosphorylase	-
G3M67_RS04690 (G3M67_04690)	-	996213..996452 (+)	240	WP_000461837.1	DUF2443 domain-containing protein	-
G3M67_RS04695 (G3M67_04695)	glmS	996453..998246 (+)	1794	WP_163524868.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54742.67 Da
• Isoelectric Point: 6.7663

>NTDB_id=421713 G3M67_RS04675 WP_163524863.1 992432..993871(-) (comH) [Helicobacter pylori strain GCT 27]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPKQVLGIYNISSHKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKEPHSNPIPSLNAPMQKPQNKPSSSQQSPQNFSYPESKLGSKNSKNSLLQPL
VTPSKVSPANEVKTPTNDAKPPLKHSSEDQENNLFITPPTEKTLPNNTPNADIDENNESNENRDNVEKQAIRDPNVKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSHAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQIEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIIKESNEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=421713 G3M67_RS04675 WP_163524863.1 992432..993871(-) (comH) [Helicobacter pylori strain GCT 27]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACCTTCTCTAACCCTCTTCAAGCCCTTGTCATTGAGCTTTTAGAAGA
GATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCCAAAGAACCCAAACAAGTTTTGGGCATTT
ATAATATCTCCTCACACAAAAAACTCACGCTCACAATCACTCACATATCCACGGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCTAACCGCCCTACTATCCCTAGAAACACCCAAATCGTTTTTTCTTCAAAAGA
ATTGAAAGAACCGCACTCAAACCCAATACCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAACCCAGCTCATCGC
AACAATCTCCTCAAAACTTTTCCTATCCAGAATCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCTAGCAAAGTAAGCCCTGCTAATGAAGTTAAAACGCCAACAAACGACGCTAAACCCCCTTTAAAACATTCTTC
AGAAGATCAAGAAAACAATCTCTTTATAACGCCACCCACTGAAAAAACGCTCCCTAATAACACCCCTAACGCTGATATTG
ATGAAAATAATGAAAGCAACGAAAATAGGGACAATGTGGAAAAACAAGCCATTAGAGATCCCAATGTTAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGACGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCGACAGATATTACCCCTTGCGATTACAGCCATGCTGAAAATAAAAGCGGTAAGATCATTACCCCTTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTCCAAGCCAGA
AGCTCTACAGAAAAGTGTAAAAGGGCTAGAGCGAGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCATGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGACC
AAATAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAGAGCAACGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCCTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGCATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	93.528	100	0.935