Detailed information
Bioinformatically predicted
Overview
| Name | comEC/comE3 | Type | Machinery gene |
| Locus tag | G3M68_RS01550 | Genome accession | NZ_CP048600 |
| Coordinates | 334948..336261 (+) | Length | 437 a.a. |
| NCBI ID | WP_163497744.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain GCT 43 | ||
| Function | ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 329948..341261
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G3M68_RS01530 (G3M68_01530) | crdR | 330274..330915 (+) | 642 | WP_163497741.1 | copper response regulator transcription factor CrdR | - |
| G3M68_RS01535 (G3M68_01535) | crdS | 330881..332083 (+) | 1203 | WP_163498361.1 | copper-sensing histidine kinase CrdS | - |
| G3M68_RS01540 (G3M68_01540) | - | 332086..333480 (+) | 1395 | WP_163497742.1 | NAD(P)H-hydrate dehydratase | - |
| G3M68_RS01545 (G3M68_01545) | - | 333491..334951 (+) | 1461 | WP_163497743.1 | replicative DNA helicase | - |
| G3M68_RS01550 (G3M68_01550) | comEC/comE3 | 334948..336261 (+) | 1314 | WP_163497744.1 | ComEC/Rec2 family competence protein | Machinery gene |
| G3M68_RS01555 (G3M68_01555) | mqnP | 336288..337172 (+) | 885 | WP_097702763.1 | menaquinone biosynthesis prenyltransferase MqnP | - |
| G3M68_RS01560 (G3M68_01560) | - | 337165..337659 (+) | 495 | WP_163497745.1 | hypothetical protein | - |
| G3M68_RS01565 (G3M68_01565) | - | 337672..338178 (+) | 507 | WP_000953111.1 | hypothetical protein | - |
| G3M68_RS01570 (G3M68_01570) | - | 338172..338975 (+) | 804 | WP_097722755.1 | phosphatidylserine decarboxylase | - |
| G3M68_RS01575 (G3M68_01575) | nadA | 338965..339975 (+) | 1011 | WP_097722756.1 | quinolinate synthase NadA | - |
| G3M68_RS01580 (G3M68_01580) | nadC | 339975..340796 (+) | 822 | WP_097722757.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
Sequence
Protein
Download Length: 437 a.a. Molecular weight: 50057.81 Da Isoelectric Point: 9.8081
>NTDB_id=421681 G3M68_RS01550 WP_163497744.1 334948..336261(+) (comEC/comE3) [Helicobacter pylori strain GCT 43]
MKDKTFQGAFELLANPKEYSWCGVVLSLLLAINLYLEYLNHQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRHAQFFGKIKPCSFLESLKSCFFQTYSFSLTQKQDFKSHLRHFIDSAHSNALVGNLYRALFIGDNL
NKDLRDRANALGINHLLAISGFHLGILSASAYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRILSFKLLVLACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQIFFKDSSFFKRSFQAIALS
VLVFLNMLIVAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDNILSMPLTIPTISISSPLWLLGAHLFLT
ILSARFFKVYLSMNVLSAGFFLYCCYQYIIMPSLIVG
MKDKTFQGAFELLANPKEYSWCGVVLSLLLAINLYLEYLNHQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRHAQFFGKIKPCSFLESLKSCFFQTYSFSLTQKQDFKSHLRHFIDSAHSNALVGNLYRALFIGDNL
NKDLRDRANALGINHLLAISGFHLGILSASAYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRILSFKLLVLACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQIFFKDSSFFKRSFQAIALS
VLVFLNMLIVAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDNILSMPLTIPTISISSPLWLLGAHLFLT
ILSARFFKVYLSMNVLSAGFFLYCCYQYIIMPSLIVG
Nucleotide
Download Length: 1314 bp
>NTDB_id=421681 G3M68_RS01550 WP_163497744.1 334948..336261(+) (comEC/comE3) [Helicobacter pylori strain GCT 43]
TTGAAAGATAAAACTTTTCAGGGGGCGTTTGAACTTCTTGCAAACCCCAAAGAATACTCATGGTGTGGGGTTGTTTTAAG
CCTTTTGTTGGCGATTAACCTTTATTTAGAATACTTGAATCACCAAAAGCTTGATTTTTCAAAACCTACAAGCCTGAACG
CTCAAATCCTGTTGCAATACCCTAAAACTAAAGATCAAAAAACCTATTTTGTCTTAAAACTCCAATCTAAGGGCATGATC
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCACGCGCAATTTTTTGGCAAGATCAAGCCTTGCTC
GTTCTTAGAGTCTCTAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACGCAAAAACAAGATTTCAAATCGCATT
TGCGCCATTTCATTGACAGCGCCCATTCCAACGCTTTGGTGGGCAATTTGTATCGAGCGTTATTCATAGGGGATAATTTG
AATAAGGATTTAAGAGATAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGGTTTCATTTAGGGATTTT
GAGCGCGAGTGCGTATTTTCTTTTCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTACAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTGGGGTATTTATTGCTATTAGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGATCTTAAGTTTTAAACTTTTGGTTTTAGCGTG
CTGTATCGCAATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTCTGTGGGGTGTGGTATATCT
TTTTGTTTTTAAAACACACTCAAATTTTTTTTAAAGATTCTTCTTTTTTCAAGCGATCGTTTCAAGCGATCGCTTTAAGC
GTGTTAGTGTTTTTGAACATGCTCATTGTCGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGCTTGTTCTTGCATGCGGTGGGTTTAGGGTCTTTATTGGATAATA
TTCTAAGCATGCCTTTAACCATCCCTACGATTTCAATCTCTTCGCCTTTATGGCTTTTGGGGGCGCATTTGTTTTTAACG
ATTTTAAGCGCGCGTTTTTTTAAAGTTTATTTGAGCATGAATGTTTTGAGCGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTTAATTGTAGGTTAG
TTGAAAGATAAAACTTTTCAGGGGGCGTTTGAACTTCTTGCAAACCCCAAAGAATACTCATGGTGTGGGGTTGTTTTAAG
CCTTTTGTTGGCGATTAACCTTTATTTAGAATACTTGAATCACCAAAAGCTTGATTTTTCAAAACCTACAAGCCTGAACG
CTCAAATCCTGTTGCAATACCCTAAAACTAAAGATCAAAAAACCTATTTTGTCTTAAAACTCCAATCTAAGGGCATGATC
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCACGCGCAATTTTTTGGCAAGATCAAGCCTTGCTC
GTTCTTAGAGTCTCTAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACGCAAAAACAAGATTTCAAATCGCATT
TGCGCCATTTCATTGACAGCGCCCATTCCAACGCTTTGGTGGGCAATTTGTATCGAGCGTTATTCATAGGGGATAATTTG
AATAAGGATTTAAGAGATAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGGTTTCATTTAGGGATTTT
GAGCGCGAGTGCGTATTTTCTTTTCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTACAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTGGGGTATTTATTGCTATTAGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGATCTTAAGTTTTAAACTTTTGGTTTTAGCGTG
CTGTATCGCAATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTCTGTGGGGTGTGGTATATCT
TTTTGTTTTTAAAACACACTCAAATTTTTTTTAAAGATTCTTCTTTTTTCAAGCGATCGTTTCAAGCGATCGCTTTAAGC
GTGTTAGTGTTTTTGAACATGCTCATTGTCGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGCTTGTTCTTGCATGCGGTGGGTTTAGGGTCTTTATTGGATAATA
TTCTAAGCATGCCTTTAACCATCCCTACGATTTCAATCTCTTCGCCTTTATGGCTTTTGGGGGCGCATTTGTTTTTAACG
ATTTTAAGCGCGCGTTTTTTTAAAGTTTATTTGAGCATGAATGTTTTGAGCGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTTAATTGTAGGTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEC/comE3 | Helicobacter pylori 26695 |
93.364 |
100 |
0.934 |