Detailed information NTG0421680

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: G3M68_RS01385
• Genome accession: NZ_CP048600
• Coordinates: 296605..298047 (-)
• Length: 480 a.a.
• NCBI ID: WP_163497720.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain GCT 43
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 291605..303047

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G3M68_RS01360 (G3M68_01360)	recG	292742..294613 (-)	1872	WP_163497719.1	ATP-dependent DNA helicase RecG	-
G3M68_RS01365 (G3M68_01365)	-	294690..295037 (+)	348	WP_163498359.1	hypothetical protein	-
G3M68_RS01370 (G3M68_01370)	-	295041..295676 (+)	636	WP_026938090.1	outer membrane protein	-
G3M68_RS01375 (G3M68_01375)	-	295673..296425 (-)	753	WP_000767567.1	exodeoxyribonuclease III	-
G3M68_RS01385 (G3M68_01385)	comH	296605..298047 (-)	1443	WP_163497720.1	competence protein	Machinery gene
G3M68_RS01390 (G3M68_01390)	dnaA	298276..299649 (-)	1374	WP_163497721.1	chromosomal replication initiator protein DnaA	-
G3M68_RS01395 (G3M68_01395)	-	299801..300343 (+)	543	WP_163497722.1	purine-nucleoside phosphorylase	-
G3M68_RS01400 (G3M68_01400)	-	300378..300617 (+)	240	WP_000461837.1	DUF2443 domain-containing protein	-
G3M68_RS01405 (G3M68_01405)	glmS	300618..302411 (+)	1794	WP_163497723.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 480 a.a.
• Molecular weight: 54658.55 Da
• Isoelectric Point: 6.9522

>NTDB_id=421680 G3M68_RS01385 WP_163497720.1 296605..298047(-) (comH) [Helicobacter pylori strain GCT 43]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPKQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKEPHSNPIPSLNAPMQKPQNKPSSSQQSPQNFSYPESKLGSKNSKNSLLQPL
VTPSKVSPTNEVKTPTNDANPPLKHSSQDQENNLFVAPPTEKTLPSNNTPNADASENNESRDNENNVEKQAIRDPNIKEF
ACGKWVYDDENLQAYRPSVLKRIDKDKEVTTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEDPQTFEAKNNFAILQA
RSSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQIEPTFYETSELAYSSTRKSEITHNE
LNLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1443 bp

>NTDB_id=421680 G3M68_RS01385 WP_163497720.1 296605..298047(-) (comH) [Helicobacter pylori strain GCT 43]
ATGAAAAAATCCCTTTGTTTGTCTTTCTTTCTGACCTTCTCTAACCCTCTTCAAGCCCTTGTCATTGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCCAAACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACGGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCTAACCGCCCTACTATCCCTAGAAACACCCAGATTGTTTTTTCTTCAAAAGA
ATTGAAAGAACCGCACTCAAACCCAATACCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAACCCAGCTCATCGC
AACAATCTCCTCAAAACTTTTCCTATCCAGAATCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCTAGCAAAGTAAGCCCTACTAATGAAGTTAAAACGCCAACAAACGACGCTAATCCCCCTTTAAAGCATTCTTC
ACAAGATCAAGAAAACAACCTTTTTGTAGCGCCACCCACTGAAAAAACGCTCCCTAGTAACAACACCCCTAACGCTGATG
CGAGTGAAAACAATGAAAGTAGGGATAACGAAAATAATGTGGAAAAACAAGCGATTAGAGATCCTAATATCAAAGAATTC
GCGTGCGGGAAGTGGGTTTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCGTTTTAAAACGCATTGATAAAGACAA
AGAGGTTACAACAGACATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTA
AAATTTCTGTTCATAAAACAGAGCCTTTAGAAGACCCTCAAACTTTTGAAGCTAAAAACAATTTCGCCATTCTCCAAGCC
AGAAGCTCTACAGAAAAGTGTAAAAGGGCTAGAGCGAGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCC
TTTAAAACAAGCGTGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCGTATATGAACGCCCTAAACAAGACG
ATCAAATAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCACAATGAA
TTGAATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAAAGCAG
TGAATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCTTTAGAAATAGAAGAGCAACCAC
GAGCCAAAAGCACGCCTTTGAGCATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTCAATGAAGTT
TAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.667	100	0.917