Detailed information NTG0421673

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: G3M69_RS05910
• Genome accession: NZ_CP048599
• Coordinates: 1249674..1251113 (+)
• Length: 479 a.a.
• NCBI ID: WP_163563264.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain GCT 97
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1244674..1256113

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G3M69_RS05890 (G3M69_05890)	glmS	1245302..1247095 (-)	1794	WP_163563261.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
G3M69_RS05895 (G3M69_05895)	-	1247096..1247335 (-)	240	WP_000461837.1	DUF2443 domain-containing protein	-
G3M69_RS05900 (G3M69_05900)	-	1247378..1247920 (-)	543	WP_163563262.1	purine-nucleoside phosphorylase	-
G3M69_RS05905 (G3M69_05905)	dnaA	1248073..1249446 (+)	1374	WP_163563263.1	chromosomal replication initiator protein DnaA	-
G3M69_RS05910 (G3M69_05910)	comH	1249674..1251113 (+)	1440	WP_163563264.1	competence protein	Machinery gene
G3M69_RS05920 (G3M69_05920)	-	1251292..1252044 (+)	753	WP_163563265.1	exodeoxyribonuclease III	-
G3M69_RS05925 (G3M69_05925)	-	1252041..1252676 (-)	636	WP_078266867.1	outer membrane protein	-
G3M69_RS05930 (G3M69_05930)	-	1252680..1253027 (-)	348	WP_078251337.1	hypothetical protein	-
G3M69_RS05935 (G3M69_05935)	recG	1253104..1254975 (+)	1872	WP_163563266.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54813.72 Da
• Isoelectric Point: 6.5117

>NTDB_id=421673 G3M69_RS05910 WP_163563264.1 1249674..1251113(+) (comH) [Helicobacter pylori strain GCT 97]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKEAHAHQMPSLNAPMQKPQNKPSSSQQPSQNFSYPEPKLGSKNSKNSLLQPL
AIPSKISPTNETQTPTNDTKPPLKHSSEDQENNLFITPPTEKTLPNNTPNADIDENNESNENRDNVEKQAVRDANIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=421673 G3M69_RS05910 WP_163563264.1 1249674..1251113(+) (comH) [Helicobacter pylori strain GCT 97]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCCCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACAATCACTCACATATCTACTGCAATTGTTTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAAGCGCACGCACACCAAATGCCTTCTTTAAATGCACCCATGCAAAAACCACAAAATAAACCCAGCTCATCGC
AACAACCTTCTCAAAACTTTTCTTACCCAGAGCCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GCAATTCCTAGCAAAATAAGTCCTACTAACGAAACTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAACATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAACGCCACCCACTGAAAAAACGCTCCCTAATAACACCCCTAACGCTGATATTG
ATGAAAACAATGAAAGCAACGAAAATAGGGACAATGTGGAAAAACAAGCCGTTAGAGATGCTAATATTAAAGAATTTGCA
TGCGGGAAGTGGGTTTATGACGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCGACAGACATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAACCACAAACTTTTGAAGCTAAAAACAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCCAGAGCAAGAAAAGACGGCACAACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGATGATC
AAGTAGAGCCAACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCACAACGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAAGGGCATTATTTAAACGATATAATCAAAGAAAGCAGCGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGCATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	97.704	100	0.977