Detailed information NTG0421424

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: G0D90_RS13595
• Genome accession: NZ_CP048448
• Coordinates: 2898255..2899397 (+)
• Length: 380 a.a.
• NCBI ID: WP_006416170.1
• Uniprot ID: A0A0H3KRG3
• Organism: Burkholderia multivorans strain P1Bm2014
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2893255..2904397

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G0D90_RS13565 (G0D90_13605)	-	2893650..2894255 (+)	606	WP_012212698.1	50S ribosomal protein L25/general stress protein Ctc	-
G0D90_RS13570 (G0D90_13610)	pth	2894364..2894963 (+)	600	WP_006398241.1	aminoacyl-tRNA hydrolase	-
G0D90_RS13575 (G0D90_13615)	hisC	2895099..2896166 (+)	1068	WP_206380727.1	histidinol-phosphate transaminase	-
G0D90_RS13580 (G0D90_13620)	-	2896233..2896496 (-)	264	WP_006406632.1	YfhL family 4Fe-4S dicluster ferredoxin	-
G0D90_RS13585 (G0D90_13625)	coaD	2896818..2897315 (-)	498	WP_006398238.1	pantetheine-phosphate adenylyltransferase	-
G0D90_RS13590 (G0D90_13630)	rsmD	2897427..2898041 (-)	615	WP_039220118.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
G0D90_RS13595 (G0D90_13635)	pilA	2898255..2899397 (+)	1143	WP_006416170.1	signal recognition particle-docking protein FtsY	Machinery gene
G0D90_RS13600 (G0D90_13640)	maiA	2899468..2900112 (-)	645	WP_039220123.1	maleylacetoacetate isomerase	-
G0D90_RS13605 (G0D90_13645)	ybiB	2900286..2901257 (+)	972	WP_206380728.1	DNA-binding protein YbiB	-
G0D90_RS13610 (G0D90_13650)	leuA	2901650..2903296 (+)	1647	WP_206380729.1	2-isopropylmalate synthase	-
G0D90_RS13615 (G0D90_13655)	-	2903432..2903815 (-)	384	WP_006398232.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 380 a.a.
• Molecular weight: 40336.19 Da
• Isoelectric Point: 4.9462

>NTDB_id=421424 G0D90_RS13595 WP_006416170.1 2898255..2899397(+) (pilA) [Burkholderia multivorans strain P1Bm2014]
MFSFFKRFKKTQEPGSAESQPADAPQPDAPSDAHDADVPPAPAPAEPAAPAVVMTVTPSDNGRDEVVETVEIVPPPVQDA
SAKKSWLARLKTGLAKTGSSITGVFVNTKIDDALYEELETALLMSDAGVDATEYLLGALREKVRVGRLTDPQQVKSALRD
LLVELLTPLEKSLVLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLTVWGERNNVTVVQ
QESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAKAHDGAPHEVLLVIDANTGQNALTQVKAF
DDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAEEFADALLG

Nucleotide

• Length: 1143 bp

>NTDB_id=421424 G0D90_RS13595 WP_006416170.1 2898255..2899397(+) (pilA) [Burkholderia multivorans strain P1Bm2014]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGGCTCCGCGGAATCGCAGCCGGCCGACGCGCCGCAACC
CGACGCCCCGTCCGACGCGCACGACGCCGACGTTCCGCCTGCACCCGCGCCTGCCGAACCGGCCGCGCCCGCCGTCGTGA
TGACGGTCACGCCGAGCGACAACGGCCGCGACGAAGTCGTCGAGACCGTCGAAATCGTGCCGCCGCCCGTGCAGGATGCA
TCGGCGAAGAAATCGTGGCTCGCGCGCCTGAAGACGGGCCTCGCGAAAACCGGCTCGAGCATCACCGGCGTATTCGTGAA
CACGAAGATCGACGACGCGCTGTACGAGGAGCTCGAAACCGCGCTGCTGATGTCCGATGCCGGCGTCGACGCGACGGAGT
ACCTGCTCGGCGCGCTGCGCGAAAAGGTGCGGGTGGGCCGCCTGACCGACCCGCAGCAGGTGAAGAGCGCGCTGCGCGAC
CTGCTCGTCGAGCTGCTGACGCCGCTCGAGAAGTCGCTCGTGCTCGGCCGTGCGCAGCCGCTCGTGATGATGATCGCGGG
CGTCAACGGCGCCGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGACCAGTCGGTGCTGCTCG
CCGCGGGCGATACGTTCCGCGCCGCGGCGCGCGAACAGCTGACGGTCTGGGGCGAACGCAACAACGTGACCGTCGTGCAG
CAGGAAAGCGGCGACCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGCGCGCGCAAGATCGACGTGATGATGGC
CGACACGGCCGGCCGCCTGCCGACGCAGCTTCATCTGATGGAAGAGCTGAAGAAGGTGAAGCGCGTGATCGCGAAGGCAC
ACGACGGCGCGCCGCACGAAGTGCTGCTCGTGATCGACGCGAACACCGGCCAGAACGCGCTCACGCAGGTGAAGGCATTC
GACGATGCGCTCGGCCTGACGGGCCTCATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGGATTCTCGCCGCGATCGC
GCGGCAGCGGCCGGTGCCCGTGTACTTCATCGGCGTCGGCGAAAAGGTCGAGGATCTGCAGCCGTTCAGCGCCGAAGAAT
TCGCGGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (98-160)

• SRP54-type protein, GTPase domain (SRP54) (181-380)

3D structure

• AlphaFold DB: A0A0H3KRG3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.846	100	0.589