Detailed information NTG0421394

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: G0D92_RS13925
• Genome accession: NZ_CP048441
• Coordinates: 2985718..2986860 (+)
• Length: 380 a.a.
• NCBI ID: WP_006416170.1
• Uniprot ID: A0A0H3KRG3
• Organism: Burkholderia multivorans strain P2Bm2011a
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2980718..2991860

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G0D92_RS13895 (G0D92_13980)	-	2981113..2981718 (+)	606	WP_012212698.1	50S ribosomal protein L25/general stress protein Ctc	-
G0D92_RS13900 (G0D92_13985)	pth	2981827..2982426 (+)	600	WP_006398241.1	aminoacyl-tRNA hydrolase	-
G0D92_RS13905 (G0D92_13990)	hisC	2982562..2983629 (+)	1068	WP_206380727.1	histidinol-phosphate transaminase	-
G0D92_RS13910 (G0D92_13995)	-	2983696..2983959 (-)	264	WP_006406632.1	YfhL family 4Fe-4S dicluster ferredoxin	-
G0D92_RS13915 (G0D92_14000)	coaD	2984281..2984778 (-)	498	WP_006398238.1	pantetheine-phosphate adenylyltransferase	-
G0D92_RS13920 (G0D92_14005)	rsmD	2984890..2985504 (-)	615	WP_039220118.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
G0D92_RS13925 (G0D92_14010)	pilA	2985718..2986860 (+)	1143	WP_006416170.1	signal recognition particle-docking protein FtsY	Machinery gene
G0D92_RS13930 (G0D92_14015)	maiA	2986931..2987575 (-)	645	WP_039220123.1	maleylacetoacetate isomerase	-
G0D92_RS13935 (G0D92_14020)	ybiB	2987749..2988720 (+)	972	WP_206380728.1	DNA-binding protein YbiB	-
G0D92_RS13940 (G0D92_14025)	leuA	2989113..2990759 (+)	1647	WP_206380729.1	2-isopropylmalate synthase	-
G0D92_RS13945 (G0D92_14030)	-	2990895..2991278 (-)	384	WP_006398232.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 380 a.a.
• Molecular weight: 40336.19 Da
• Isoelectric Point: 4.9462

>NTDB_id=421394 G0D92_RS13925 WP_006416170.1 2985718..2986860(+) (pilA) [Burkholderia multivorans strain P2Bm2011a]
MFSFFKRFKKTQEPGSAESQPADAPQPDAPSDAHDADVPPAPAPAEPAAPAVVMTVTPSDNGRDEVVETVEIVPPPVQDA
SAKKSWLARLKTGLAKTGSSITGVFVNTKIDDALYEELETALLMSDAGVDATEYLLGALREKVRVGRLTDPQQVKSALRD
LLVELLTPLEKSLVLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLTVWGERNNVTVVQ
QESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAKAHDGAPHEVLLVIDANTGQNALTQVKAF
DDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAEEFADALLG

Nucleotide

• Length: 1143 bp

>NTDB_id=421394 G0D92_RS13925 WP_006416170.1 2985718..2986860(+) (pilA) [Burkholderia multivorans strain P2Bm2011a]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGGCTCCGCGGAATCGCAGCCGGCCGACGCGCCGCAACC
CGACGCCCCGTCCGACGCGCACGACGCCGACGTTCCGCCTGCACCCGCGCCTGCCGAACCGGCCGCGCCCGCCGTCGTGA
TGACGGTCACGCCGAGCGACAACGGCCGCGACGAAGTCGTCGAGACCGTCGAAATCGTGCCGCCGCCCGTGCAGGATGCA
TCGGCGAAGAAATCGTGGCTCGCGCGCCTGAAGACGGGCCTCGCGAAAACCGGCTCGAGCATCACCGGCGTATTCGTGAA
CACGAAGATCGACGACGCGCTGTACGAGGAGCTCGAAACCGCGCTGCTGATGTCCGATGCCGGCGTCGACGCGACGGAGT
ACCTGCTCGGCGCGCTGCGCGAAAAGGTGCGGGTGGGCCGCCTGACCGACCCGCAGCAGGTGAAGAGCGCGCTGCGCGAC
CTGCTCGTCGAGCTGCTGACGCCGCTCGAGAAGTCGCTCGTGCTCGGCCGTGCGCAGCCGCTCGTGATGATGATCGCGGG
CGTCAACGGCGCCGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGACCAGTCGGTGCTGCTCG
CCGCGGGCGATACGTTCCGCGCCGCGGCGCGCGAACAGCTGACGGTCTGGGGCGAACGCAACAACGTGACCGTCGTGCAG
CAGGAAAGCGGCGACCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGCGCGCGCAAGATCGACGTGATGATGGC
CGACACGGCCGGCCGCCTGCCGACGCAGCTTCATCTGATGGAAGAGCTGAAGAAGGTGAAGCGCGTGATCGCGAAGGCAC
ACGACGGCGCGCCGCACGAAGTGCTGCTCGTGATCGACGCGAACACCGGCCAGAACGCGCTCACGCAGGTGAAGGCATTC
GACGATGCGCTCGGCCTGACGGGCCTCATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGGATTCTCGCCGCGATCGC
GCGGCAGCGGCCGGTGCCCGTGTACTTCATCGGCGTCGGCGAAAAGGTCGAGGATCTGCAGCCGTTCAGCGCCGAAGAAT
TCGCGGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (98-160)

• SRP54-type protein, GTPase domain (SRP54) (181-380)

3D structure

• AlphaFold DB: A0A0H3KRG3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.846	100	0.589