Detailed information
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | GYM54_RS10175 | Genome accession | NZ_CP048411 |
| Coordinates | 2228546..2229094 (+) | Length | 182 a.a. |
| NCBI ID | WP_181104892.1 | Uniprot ID | - |
| Organism | Pseudomonas sp. MTM4 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2223546..2234094
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GYM54_RS10150 (GYM54_10135) | - | 2223695..2224522 (+) | 828 | WP_181104883.1 | hypothetical protein | - |
| GYM54_RS10155 (GYM54_10140) | - | 2224626..2225669 (+) | 1044 | WP_181104885.1 | tetratricopeptide repeat protein | - |
| GYM54_RS10160 (GYM54_10145) | thiO | 2226107..2227201 (-) | 1095 | WP_181104887.1 | glycine oxidase ThiO | - |
| GYM54_RS10165 (GYM54_10150) | - | 2227362..2227868 (+) | 507 | WP_181104889.1 | GspH/FimT family pseudopilin | - |
| GYM54_RS10170 (GYM54_10155) | - | 2228058..2228537 (+) | 480 | WP_131651866.1 | GspH/FimT family pseudopilin | - |
| GYM54_RS10175 (GYM54_10160) | pilV | 2228546..2229094 (+) | 549 | WP_181104892.1 | type IV pilus modification protein PilV | Machinery gene |
| GYM54_RS10180 (GYM54_10165) | - | 2229091..2229942 (+) | 852 | WP_181104894.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| GYM54_RS10185 (GYM54_10170) | - | 2229939..2230616 (+) | 678 | WP_131651869.1 | PilX N-terminal domain-containing pilus assembly protein | - |
Sequence
Protein
Download Length: 182 a.a. Molecular weight: 19720.44 Da Isoelectric Point: 4.3080
>NTDB_id=421154 GYM54_RS10175 WP_181104892.1 2228546..2229094(+) (pilV) [Pseudomonas sp. MTM4]
MSNNRGFSLIEVMVTLVLTTIGILGMVAMQGRSIQYTQDSLQRNTAIMLASDLAEIIRANPGEVFTRTPPAEPVYSGFKN
TSLFYKDKGSDFTTAPADCVANPTSAIEMRNCWVETVEASLPGAEELLESAFYICRSSTLGTCDGNGSMLEIQLAWTVKA
GACPDDQAPNATTCIYRTRVEL
MSNNRGFSLIEVMVTLVLTTIGILGMVAMQGRSIQYTQDSLQRNTAIMLASDLAEIIRANPGEVFTRTPPAEPVYSGFKN
TSLFYKDKGSDFTTAPADCVANPTSAIEMRNCWVETVEASLPGAEELLESAFYICRSSTLGTCDGNGSMLEIQLAWTVKA
GACPDDQAPNATTCIYRTRVEL
Nucleotide
Download Length: 549 bp
>NTDB_id=421154 GYM54_RS10175 WP_181104892.1 2228546..2229094(+) (pilV) [Pseudomonas sp. MTM4]
ATGAGCAACAACAGAGGCTTTAGCTTGATCGAAGTGATGGTCACCCTGGTACTGACCACCATCGGCATTCTCGGCATGGT
TGCCATGCAGGGCCGCAGCATTCAGTACACCCAGGATTCGTTACAACGAAACACAGCAATCATGCTGGCCAGCGACTTGG
CCGAGATCATTCGCGCCAACCCTGGTGAAGTATTCACGAGGACCCCGCCGGCCGAACCCGTGTATAGCGGCTTCAAGAAC
ACTTCTCTTTTTTACAAAGACAAAGGCAGTGATTTCACGACTGCTCCGGCGGACTGTGTCGCCAACCCTACGAGTGCCAT
CGAGATGCGCAACTGCTGGGTAGAAACCGTCGAAGCCTCTCTGCCTGGCGCTGAGGAACTCCTCGAATCTGCCTTCTATA
TCTGCCGCAGCTCCACACTCGGGACCTGTGACGGCAATGGCTCGATGCTGGAAATCCAGCTGGCCTGGACCGTCAAGGCA
GGTGCCTGCCCCGATGATCAAGCGCCCAACGCCACCACCTGCATCTACAGAACGCGAGTAGAGCTATGA
ATGAGCAACAACAGAGGCTTTAGCTTGATCGAAGTGATGGTCACCCTGGTACTGACCACCATCGGCATTCTCGGCATGGT
TGCCATGCAGGGCCGCAGCATTCAGTACACCCAGGATTCGTTACAACGAAACACAGCAATCATGCTGGCCAGCGACTTGG
CCGAGATCATTCGCGCCAACCCTGGTGAAGTATTCACGAGGACCCCGCCGGCCGAACCCGTGTATAGCGGCTTCAAGAAC
ACTTCTCTTTTTTACAAAGACAAAGGCAGTGATTTCACGACTGCTCCGGCGGACTGTGTCGCCAACCCTACGAGTGCCAT
CGAGATGCGCAACTGCTGGGTAGAAACCGTCGAAGCCTCTCTGCCTGGCGCTGAGGAACTCCTCGAATCTGCCTTCTATA
TCTGCCGCAGCTCCACACTCGGGACCTGTGACGGCAATGGCTCGATGCTGGAAATCCAGCTGGCCTGGACCGTCAAGGCA
GGTGCCTGCCCCGATGATCAAGCGCCCAACGCCACCACCTGCATCTACAGAACGCGAGTAGAGCTATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
48.619 |
99.451 |
0.484 |