Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   M655_RS01500 Genome accession   NZ_CP048274
Coordinates   291741..292694 (+) Length   317 a.a.
NCBI ID   WP_005830159.1    Uniprot ID   A0A9X7XNU7
Organism   Brevibacillus sp. NSP2.1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 286741..297694
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M655_RS01485 (M655_001460) - 288538..288894 (-) 357 WP_005830165.1 response regulator -
  M655_RS01490 (M655_001465) - 289244..290614 (+) 1371 WP_035422921.1 MATE family efflux transporter -
  M655_RS01495 (M655_001470) - 290748..291500 (+) 753 WP_026557636.1 DUF4097 family beta strand repeat-containing protein -
  M655_RS01500 (M655_001475) ceuB 291741..292694 (+) 954 WP_005830159.1 ABC transporter permease Machinery gene
  M655_RS01505 (M655_001480) - 292691..293632 (+) 942 WP_007778320.1 iron chelate uptake ABC transporter family permease subunit -
  M655_RS01510 (M655_001485) - 293629..294387 (+) 759 WP_026557635.1 ABC transporter ATP-binding protein -
  M655_RS01515 (M655_001490) - 294494..295474 (+) 981 WP_005830156.1 siderophore ABC transporter substrate-binding protein -
  M655_RS01520 (M655_001495) - 295614..296489 (-) 876 WP_005830155.1 ABC transporter ATP-binding protein -
  M655_RS01525 (M655_001500) - 296697..296996 (-) 300 WP_005830153.1 YxcD family protein -
  M655_RS01530 (M655_001505) - 296984..297424 (-) 441 WP_005830151.1 hypothetical protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35096.39 Da        Isoelectric Point: 9.8050

>NTDB_id=420488 M655_RS01500 WP_005830159.1 291741..292694(+) (ceuB) [Brevibacillus sp. NSP2.1]
MKKRYLVVALILLSMVSLFIGVKDISPLELFNLSDDKVQVMWISRIPRLISIIIAGISMSVVGLIMQQLTRNKFVSPTTA
GTEDSVRFGILVSLLVFVDASVWVKLLVAFVFALLGTFVFMKILDRVKYKDSIFIPLVGLMFGNIVGSITTFFAYKHDLI
QNMSSWLHGDFSSIMRGNYELLYISIPLVVIAYLFANKFTIAGMGEEFAINLGLNYKQVVNIGLAIVAMVSSVVILTVGT
IPFLGLIIPNIVTLYLGDNLKKSLAHTALLGAVFVLCCDILGRLIIFPYEISIGLMVGVVGSGIFVYLLMRRKAYER

Nucleotide


Download         Length: 954 bp        

>NTDB_id=420488 M655_RS01500 WP_005830159.1 291741..292694(+) (ceuB) [Brevibacillus sp. NSP2.1]
ATGAAAAAAAGATATTTGGTTGTGGCCCTGATTCTGCTATCAATGGTATCCCTGTTTATCGGCGTGAAGGACATTTCGCC
CCTGGAGCTGTTCAATCTCAGCGACGACAAGGTTCAGGTGATGTGGATCAGCCGGATTCCCCGCCTGATTAGCATCATCA
TCGCCGGTATCAGCATGAGTGTGGTCGGCCTCATCATGCAGCAACTGACCCGCAATAAATTTGTCTCGCCTACGACGGCG
GGGACCGAAGATTCTGTCCGCTTCGGGATTCTTGTCTCCTTGCTTGTGTTTGTCGACGCCTCTGTATGGGTGAAGCTGCT
CGTGGCATTCGTTTTCGCTCTGCTCGGAACGTTTGTCTTCATGAAAATTCTCGACAGAGTGAAGTACAAGGACTCGATCT
TCATTCCGCTGGTCGGGCTAATGTTCGGGAATATCGTCGGGTCGATCACGACGTTTTTCGCCTACAAGCACGACCTGATC
CAGAACATGTCGTCCTGGTTGCACGGCGATTTTTCCTCCATCATGAGGGGCAACTACGAGCTTCTATACATAAGCATTCC
GCTGGTCGTCATTGCGTACCTGTTTGCCAACAAGTTTACGATCGCAGGGATGGGCGAGGAATTTGCCATCAACCTCGGGC
TGAATTACAAGCAGGTCGTCAATATCGGGCTGGCGATTGTCGCGATGGTTTCGTCCGTCGTCATCCTCACAGTGGGAACG
ATCCCGTTTTTAGGGCTTATTATTCCTAATATTGTGACGCTTTATCTCGGTGACAACCTGAAAAAAAGCTTGGCCCATAC
CGCCTTGCTGGGCGCGGTGTTCGTCCTATGCTGCGATATTTTGGGACGCCTCATCATCTTCCCGTACGAAATTTCGATCG
GTTTGATGGTCGGGGTAGTGGGCAGCGGTATATTCGTGTACTTACTCATGAGAAGAAAGGCATATGAACGATGA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

54.633

98.738

0.539

Multiple sequence alignment