Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   M654_RS21340 Genome accession   NZ_CP048273
Coordinates   4111819..4112769 (-) Length   316 a.a.
NCBI ID   WP_026585910.1    Uniprot ID   A0A6I7FEY7
Organism   Bacillus sp. NSP9.1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 4106819..4117769
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M654_RS21310 (M654_021240) - 4107408..4107528 (+) 121 Protein_4241 transporter -
  M654_RS21315 (M654_021245) - 4107743..4108474 (-) 732 WP_026585914.1 glycoside hydrolase family 16 protein -
  M654_RS21320 (M654_021250) - 4108703..4108966 (+) 264 Protein_4243 cation transporter dimerization domain-containing protein -
  M654_RS21325 (M654_021255) - 4109172..4110110 (-) 939 WP_026585913.1 siderophore ABC transporter substrate-binding protein -
  M654_RS21330 (M654_021260) - 4110121..4110882 (-) 762 WP_026585912.1 ABC transporter ATP-binding protein -
  M654_RS21335 (M654_021265) - 4110879..4111826 (-) 948 WP_026585911.1 iron chelate uptake ABC transporter family permease subunit -
  M654_RS21340 (M654_021270) ceuB 4111819..4112769 (-) 951 WP_026585910.1 ABC transporter permease Machinery gene
  M654_RS21345 (M654_021275) - 4113028..4114389 (+) 1362 WP_026585909.1 aspartate kinase -
  M654_RS21350 (M654_021280) - 4114535..4116253 (+) 1719 WP_026585908.1 methyl-accepting chemotaxis protein -
  M654_RS21355 (M654_021285) - 4116332..4117756 (-) 1425 WP_026585907.1 HAMP domain-containing sensor histidine kinase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35098.52 Da        Isoelectric Point: 9.9687

>NTDB_id=420479 M654_RS21340 WP_026585910.1 4111819..4112769(-) (ceuB) [Bacillus sp. NSP9.1]
MKLRYLWLLLIILSFCSVFIGVKPLSPFDLFHLDKDDIQTLYISRIPRMISIVLAGMSLAICGLMMQQLTRNKFVSPTTA
GTMDWARLGVIIAMMFFSSAGLVVKMLFAFVFALIGSFLFVNVLDRIKFKDAVFIPLVGLMLGSVVSAVSTFIAYQYNLI
QNLNAWFEGNFSLIMKGRYELLYLSIPLVIIAYLYANKFTVAGMGESFAVNLGLNYKRVVNIGLIIVSVISSVVILTVGT
LPFLGLIIPNIVSIYRGDHLKNSLPHTALLGAVFVLFCDILGRLIIFPYEISVGLMVGIIGSGVFLYLLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=420479 M654_RS21340 WP_026585910.1 4111819..4112769(-) (ceuB) [Bacillus sp. NSP9.1]
ATGAAATTACGGTATTTATGGCTACTGCTTATCATTCTTTCTTTCTGTTCTGTTTTCATCGGCGTGAAGCCATTATCGCC
TTTTGATCTTTTTCATTTGGATAAGGACGACATTCAAACGCTTTACATAAGCAGGATCCCCCGCATGATCAGCATCGTGC
TCGCAGGCATGAGCCTCGCCATCTGCGGGCTGATGATGCAGCAGCTGACACGCAATAAATTTGTTTCACCGACGACGGCC
GGAACGATGGATTGGGCGAGACTCGGCGTGATCATTGCCATGATGTTTTTTTCTTCGGCCGGGCTTGTGGTGAAAATGCT
GTTTGCCTTCGTGTTCGCACTGATCGGCAGCTTTCTGTTTGTCAACGTTTTGGACAGAATCAAGTTTAAAGACGCCGTGT
TCATCCCTCTTGTCGGCTTGATGCTCGGAAGCGTCGTCAGCGCGGTCTCGACGTTTATCGCTTATCAGTATAATCTCATC
CAAAATCTCAATGCATGGTTTGAGGGTAATTTCTCACTGATCATGAAAGGGCGGTATGAGCTGTTATATCTGAGTATTCC
GCTCGTGATCATCGCCTATCTGTACGCCAACAAATTTACGGTAGCCGGAATGGGTGAGAGCTTTGCCGTCAACTTGGGGC
TGAATTACAAGCGAGTGGTCAACATCGGCCTGATCATCGTGTCGGTGATCTCATCCGTCGTTATTTTGACGGTCGGGACG
CTTCCGTTTCTCGGTCTGATCATCCCAAACATCGTCTCGATTTACCGCGGGGACCATTTGAAAAACAGCCTTCCTCATAC
GGCATTGCTCGGCGCCGTATTCGTCCTGTTTTGCGACATATTAGGGCGGCTGATCATTTTTCCGTATGAAATTTCCGTCG
GTTTGATGGTCGGCATCATCGGGAGCGGCGTATTTCTTTATTTGCTGTTAAGGAGAAAAGCCTATGCGTGA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I7FEY7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.949

100

0.509

Multiple sequence alignment