Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Machinery gene
Locus tag   M654_RS17375 Genome accession   NZ_CP048273
Coordinates   3321388..3322137 (-) Length   249 a.a.
NCBI ID   WP_026588126.1    Uniprot ID   A0A6I7F8X9
Organism   Bacillus sp. NSP9.1     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3316388..3327137
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M654_RS17350 (M654_017295) mreC 3316658..3317566 (-) 909 WP_026588121.1 rod shape-determining protein MreC -
  M654_RS17355 (M654_017300) - 3317597..3318607 (-) 1011 WP_026588122.1 rod shape-determining protein -
  M654_RS17360 (M654_017305) radC 3318695..3319369 (-) 675 WP_026588123.1 DNA repair protein RadC -
  M654_RS17365 (M654_017310) - 3319424..3319996 (-) 573 WP_026588124.1 Maf family protein -
  M654_RS17370 (M654_017315) - 3320160..3321182 (-) 1023 WP_026588125.1 SPOR domain-containing protein -
  M654_RS17375 (M654_017320) comC 3321388..3322137 (-) 750 WP_026588126.1 A24 family peptidase Machinery gene
  M654_RS17380 (M654_017325) - 3322252..3323565 (-) 1314 WP_026588127.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  M654_RS17385 (M654_017330) - 3323644..3326286 (-) 2643 WP_026588128.1 valine--tRNA ligase -
  M654_RS17390 (M654_017335) - 3326746..3326937 (+) 192 WP_026588129.1 hypothetical protein -

Sequence

Protein


Download         Length: 249 a.a.        Molecular weight: 26745.72 Da        Isoelectric Point: 9.4199

>NTDB_id=420472 M654_RS17375 WP_026588126.1 3321388..3322137(-) (comC) [Bacillus sp. NSP9.1]
MFLAYLFLSGLVLGSFFNAAGRRIPGKISLIFPRSSCPVCRRKLTSLELIPVLSYLFLRGKCKGCKSPVSILYPAVELLT
ALLFVLAGLRFKSPGELLLMLALFSLLLIVLVSDIAYMVIPDAILCFFLPFFVIGRMLVPLEPWYSGLPGAAAGLLLPLI
VKLFAKDGIGGGDVKLFAVIGFVLGARLIFPVFFISAAAGTLLGFAGMIAGKVKGSEPIPFAPAILIGTVIVCFYGEPLI
DSYIELLHI

Nucleotide


Download         Length: 750 bp        

>NTDB_id=420472 M654_RS17375 WP_026588126.1 3321388..3322137(-) (comC) [Bacillus sp. NSP9.1]
ATGTTTTTGGCTTATCTTTTTTTATCAGGCTTAGTGCTCGGCTCTTTTTTTAATGCAGCCGGCCGCCGCATCCCCGGCAA
AATATCGCTGATCTTCCCCCGCTCCTCATGTCCTGTCTGCCGCCGCAAACTGACCTCCCTTGAGCTTATTCCGGTTTTGT
CATACCTGTTTCTGCGCGGAAAATGCAAGGGCTGTAAAAGCCCTGTTTCCATTCTTTATCCCGCTGTTGAACTGTTGACT
GCATTGCTGTTTGTCTTGGCGGGGCTCCGTTTTAAAAGCCCGGGAGAGCTGCTGCTCATGCTCGCCCTTTTTTCCTTGCT
TTTGATCGTGTTGGTTTCAGATATCGCGTATATGGTGATTCCAGATGCCATCCTTTGTTTTTTTCTGCCTTTTTTCGTCA
TTGGCAGAATGCTGGTTCCGCTTGAGCCCTGGTATTCCGGCTTGCCAGGAGCGGCCGCCGGTCTCCTGTTGCCGCTTATT
GTCAAGCTGTTCGCGAAGGATGGGATCGGCGGGGGAGATGTGAAATTGTTCGCCGTTATTGGCTTTGTCCTTGGCGCAAG
GCTGATTTTTCCCGTTTTTTTTATCTCCGCAGCGGCAGGAACATTGCTGGGCTTCGCCGGAATGATCGCCGGAAAGGTCA
AAGGAAGCGAGCCGATACCTTTTGCACCTGCCATTTTAATCGGAACAGTGATTGTCTGCTTCTATGGAGAACCGTTGATT
GATTCATATATTGAACTGTTGCACATATGA

Domains

Predicted by InterproScan.

Type IV leader peptidase family (Peptidase_A24)

(102-204)

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(9-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I7F8X9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Bacillus subtilis subsp. subtilis str. 168

50.82

97.992

0.498
  pilD Vibrio cholerae strain A1552

32.374

100

0.361

Multiple sequence alignment