Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   M654_RS15565 Genome accession   NZ_CP048273
Coordinates   2989122..2989922 (-) Length   266 a.a.
NCBI ID   WP_026587799.1    Uniprot ID   A0A6I7FEM9
Organism   Bacillus sp. NSP9.1     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2984122..2994922
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M654_RS15540 (M654_015490) - 2985659..2985904 (+) 246 WP_026587794.1 DUF2627 domain-containing protein -
  M654_RS15545 (M654_015495) - 2985941..2986669 (-) 729 WP_026587795.1 glycerophosphodiester phosphodiesterase -
  M654_RS15550 (M654_015500) - 2986822..2987442 (-) 621 WP_035428363.1 N-acetylmuramoyl-L-alanine amidase -
  M654_RS15555 (M654_015505) - 2987478..2987786 (-) 309 WP_026587797.1 hypothetical protein -
  M654_RS23610 - 2988208..2988756 (-) 549 WP_026587798.1 serine acetyltransferase -
  M654_RS15565 (M654_015515) spo0A 2989122..2989922 (-) 801 WP_026587799.1 sporulation transcription factor Spo0A Regulator
  M654_RS15570 (M654_015520) spoIVB 2990213..2991496 (-) 1284 WP_026587800.1 SpoIVB peptidase -
  M654_RS15575 (M654_015525) recN 2991677..2993407 (-) 1731 WP_026587801.1 DNA repair protein RecN Machinery gene
  M654_RS15580 (M654_015530) argR 2993437..2993886 (-) 450 WP_026587802.1 transcriptional regulator ArgR -
  M654_RS15585 (M654_015535) - 2993993..2994838 (-) 846 WP_026587803.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29568.08 Da        Isoelectric Point: 6.6109

>NTDB_id=420457 M654_RS15565 WP_026587799.1 2989122..2989922(-) (spo0A) [Bacillus sp. NSP9.1]
MEKIKVCVADDNRELVGLLSEYIEGQNDMEVLGVAYNGQECLSLFKDKEPDVLVLDIIMPHLDGLAVLERLRESQLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGSQLTHRAPSSQSSVLRPQPESPKKNLDASITTII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MSKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=420457 M654_RS15565 WP_026587799.1 2989122..2989922(-) (spo0A) [Bacillus sp. NSP9.1]
GTGGAGAAAATTAAAGTATGTGTTGCTGATGATAACAGAGAACTTGTCGGACTGTTAAGCGAATATATTGAGGGGCAAAA
CGACATGGAAGTGCTCGGTGTGGCTTATAACGGGCAGGAATGTCTTTCTTTGTTTAAAGACAAGGAGCCCGACGTGCTCG
TTCTTGATATTATCATGCCTCATCTTGACGGCCTGGCTGTGCTTGAAAGGCTGAGGGAGTCACAGCTCAAAAAACAGCCG
AATGTCATTATGCTGACGGCGTTCGGACAGGAAGACGTGACGAAAAAAGCTGTTGATTTAGGCGCGTCATATTTTATCCT
AAAGCCGTTTGATATGGAGAATCTGGTCGGCCATATCCGCCAGGTCAGCGGAAATGGTTCACAATTGACGCACCGCGCGC
CGTCTTCGCAAAGCAGCGTGCTTCGTCCGCAGCCTGAATCGCCGAAGAAAAACCTCGATGCCAGCATCACGACGATCATC
CATGAAATCGGTGTTCCCGCTCATATAAAAGGATATTTATACTTACGTGAAGCCATTTCCATGGTGTATAACGATATTGA
ACTTTTAGGCAGCATCACAAAAGTGCTGTATCCAGATATCGCTAAAAAATTCAACACAACGGCAAGCCGAGTCGAACGGG
CCATCCGCCACGCGATCGAAGTCGCATGGAGCAGAGGCAACATCGATTCGATCTCATCGCTGTTCGGCTACACGGTCAGC
ATGTCAAAAGCAAAGCCTACCAACAGCGAGTTCATCGCGATGGTCGCCGACAAGCTGCGCCTGGAGCATAAGGCGTCTTA
A

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I7FEM9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

92.135

100

0.925

Multiple sequence alignment