Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   M654_RS10065 Genome accession   NZ_CP048273
Coordinates   1939007..1939597 (+) Length   196 a.a.
NCBI ID   WP_026586778.1    Uniprot ID   -
Organism   Bacillus sp. NSP9.1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1934007..1944597
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M654_RS10035 (M654_010020) - 1934311..1934763 (+) 453 WP_026586772.1 flavodoxin -
  M654_RS10040 (M654_010025) dapD 1934867..1935577 (+) 711 WP_026586773.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  M654_RS10045 (M654_010030) - 1935645..1936769 (+) 1125 WP_026586774.1 N-acetyldiaminopimelate deacetylase -
  M654_RS10050 (M654_010035) - 1936832..1937077 (+) 246 WP_026586775.1 YkuS family protein -
  M654_RS10055 (M654_010040) ahpA 1937369..1937911 (+) 543 WP_026586776.1 biofilm-specific peroxidase AhpA -
  M654_RS10060 (M654_010045) - 1938001..1938459 (+) 459 WP_026586777.1 redoxin domain-containing protein -
  M654_RS10065 (M654_010050) rok 1939007..1939597 (+) 591 WP_026586778.1 transcriptional regulator Rok Regulator
  M654_RS10070 (M654_010055) - 1939743..1940705 (-) 963 WP_026586779.1 hypothetical protein -
  M654_RS10075 (M654_010060) - 1940867..1941454 (+) 588 WP_026586780.1 molybdenum cofactor guanylyltransferase -
  M654_RS10080 (M654_010065) - 1941559..1942572 (+) 1014 WP_026586781.1 MoeB/ThiF family adenylyltransferase -
  M654_RS10085 (M654_010070) glp 1942591..1943883 (+) 1293 WP_026586782.1 gephyrin-like molybdotransferase Glp -
  M654_RS10090 (M654_010075) mobB 1943850..1944404 (+) 555 WP_026586783.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 196 a.a.        Molecular weight: 22636.58 Da        Isoelectric Point: 9.8634

>NTDB_id=420450 M654_RS10065 WP_026586778.1 1939007..1939597(+) (rok) [Bacillus sp. NSP9.1]
MFNEREALRLRLEQLNEAEIKVIREYQIERDNIYAKLRELDRPSSFNDTKKDFRTERKSESLPVLAELAAQEMKSYQQQQ
QPHTSQKNQQQTSPQASALPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMT
TFMQSLIKMYPEVKKPYRGQYILEGEISTETETEQQ

Nucleotide


Download         Length: 591 bp        

>NTDB_id=420450 M654_RS10065 WP_026586778.1 1939007..1939597(+) (rok) [Bacillus sp. NSP9.1]
ATGTTTAACGAGAGGGAAGCATTGCGTTTAAGATTAGAGCAGCTGAATGAGGCTGAGATTAAGGTCATTAGGGAGTATCA
AATCGAGCGTGATAATATTTATGCCAAGCTGCGCGAATTGGATCGCCCATCCAGCTTTAACGATACAAAAAAAGATTTTC
GAACAGAGCGAAAAAGCGAATCACTCCCGGTTTTAGCTGAATTGGCTGCACAAGAGATGAAAAGCTACCAGCAGCAACAG
CAGCCCCATACATCTCAAAAAAACCAGCAGCAGACTTCTCCGCAAGCCTCCGCACTGCCTGCCGGAATTCCAGACGGAAC
GACAAGGCGCAGAAGGGGAACAGCCCGTCCGGGGTCAAAGGCTGCAAAACTGCGTGAAGCGGCGATTAAAACATTAAAAC
GCCACAATGCGGCAATCAAAAGCTCCGAACTTCAAAAAGAAATTGAAAAAGAAAGCGGACTTGAGATCCCGAATATGACA
ACCTTCATGCAAAGCTTGATCAAGATGTACCCGGAAGTCAAAAAACCATACCGCGGACAATATATACTAGAGGGCGAAAT
CTCTACCGAGACTGAGACTGAACAGCAATAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

83.069

96.429

0.801

Multiple sequence alignment