Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | M654_RS08650 | Genome accession | NZ_CP048273 |
| Coordinates | 1670811..1671950 (-) | Length | 379 a.a. |
| NCBI ID | WP_026586520.1 | Uniprot ID | - |
| Organism | Bacillus sp. NSP9.1 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1665811..1676950
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M654_RS08605 (M654_008590) | - | 1666564..1666758 (+) | 195 | WP_026586512.1 | Fur-regulated basic protein FbpA | - |
| M654_RS08610 (M654_008595) | - | 1666866..1667126 (+) | 261 | WP_026586513.1 | IDEAL domain-containing protein | - |
| M654_RS08615 (M654_008600) | - | 1667263..1667721 (+) | 459 | WP_026588402.1 | RusA family crossover junction endodeoxyribonuclease | - |
| M654_RS08620 (M654_008605) | - | 1667691..1668368 (+) | 678 | WP_026586514.1 | hypothetical protein | - |
| M654_RS08625 (M654_008610) | - | 1668499..1668708 (+) | 210 | WP_026586515.1 | XtrA/YqaO family protein | - |
| M654_RS08630 (M654_008615) | - | 1668725..1669162 (+) | 438 | WP_026586516.1 | hypothetical protein | - |
| M654_RS08635 (M654_008620) | - | 1669290..1669490 (+) | 201 | WP_026586517.1 | XtrA/YqaO family protein | - |
| M654_RS08640 (M654_008625) | - | 1669487..1670173 (+) | 687 | WP_026586518.1 | hypothetical protein | - |
| M654_RS08645 (M654_008630) | - | 1670267..1670650 (+) | 384 | WP_026586519.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
| M654_RS08650 (M654_008635) | rapC | 1670811..1671950 (-) | 1140 | WP_026586520.1 | tetratricopeptide repeat protein | Regulator |
| M654_RS08655 (M654_008640) | - | 1672186..1674132 (+) | 1947 | WP_035428007.1 | T7SS effector LXG polymorphic toxin | - |
| M654_RS08660 (M654_008645) | - | 1674144..1674608 (+) | 465 | WP_026586521.1 | SMI1/KNR4 family protein | - |
| M654_RS24100 | - | 1674962..1675093 (+) | 132 | WP_268884414.1 | hypothetical protein | - |
| M654_RS23530 | - | 1675187..1675342 (+) | 156 | WP_026586522.1 | hypothetical protein | - |
| M654_RS08665 (M654_008650) | - | 1675699..1675989 (+) | 291 | WP_026586523.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 379 a.a. Molecular weight: 45236.57 Da Isoelectric Point: 5.4069
>NTDB_id=420446 M654_RS08650 WP_026586520.1 1670811..1671950(-) (rapC) [Bacillus sp. NSP9.1]
MTGKISSASVGVKINEWYRYIRTFSVPDAEILKAEIERDIQEMEEDQDLLLYYSLMDFRHRIMLEYIAPGENSSSRPTIS
ELSRNIDNKQARLKGILEYYYNFFRGMYENEKREYISAITYYKQAENKLALVEDEVEKAEFFFKIAEVYYYMKQTYFSMH
YAQKALERYREQETYNLRIIQCHTIMAGNWIDANRYEKAVLHLKKALEMAEEEKNKPMIARALYNIGVCYYNQDLYEQAV
DNFQKAISIFKEEGFIKSLPQAYFLMTQIQFKQKNKKKAQLFFDEGYEHSNEVGDSIYGLKFEFLKGLYMGDPDNKKIDH
CLLHLESKKMYPDVEDMSLDVAKYYHENKCFEMSSLYFLKVEEARKQTQRGDCLYEVEV
MTGKISSASVGVKINEWYRYIRTFSVPDAEILKAEIERDIQEMEEDQDLLLYYSLMDFRHRIMLEYIAPGENSSSRPTIS
ELSRNIDNKQARLKGILEYYYNFFRGMYENEKREYISAITYYKQAENKLALVEDEVEKAEFFFKIAEVYYYMKQTYFSMH
YAQKALERYREQETYNLRIIQCHTIMAGNWIDANRYEKAVLHLKKALEMAEEEKNKPMIARALYNIGVCYYNQDLYEQAV
DNFQKAISIFKEEGFIKSLPQAYFLMTQIQFKQKNKKKAQLFFDEGYEHSNEVGDSIYGLKFEFLKGLYMGDPDNKKIDH
CLLHLESKKMYPDVEDMSLDVAKYYHENKCFEMSSLYFLKVEEARKQTQRGDCLYEVEV
Nucleotide
Download Length: 1140 bp
>NTDB_id=420446 M654_RS08650 WP_026586520.1 1670811..1671950(-) (rapC) [Bacillus sp. NSP9.1]
TTGACTGGAAAGATTTCTTCAGCGTCTGTCGGTGTGAAGATAAATGAATGGTATAGGTATATAAGGACTTTTAGTGTGCC
TGATGCCGAAATATTAAAGGCAGAGATTGAACGAGACATTCAAGAAATGGAAGAAGATCAAGATTTGCTTTTGTATTACT
CTTTAATGGACTTTAGGCATCGCATTATGCTTGAATACATTGCACCTGGCGAAAATTCTTCCTCGCGTCCGACAATTTCA
GAATTGTCGCGCAATATAGACAACAAACAGGCTCGTTTAAAAGGCATCCTTGAATATTATTATAATTTTTTCCGTGGTAT
GTATGAAAATGAAAAAAGAGAGTACATATCCGCCATTACTTACTATAAACAGGCAGAGAATAAACTTGCTCTTGTTGAAG
ACGAAGTGGAAAAAGCGGAGTTTTTCTTTAAAATTGCAGAAGTCTATTACTACATGAAACAGACATATTTTTCAATGCAT
TATGCACAAAAAGCTCTTGAGAGATATAGAGAACAAGAAACATACAATTTGAGAATTATCCAGTGCCATACAATAATGGC
CGGAAACTGGATCGATGCTAACAGATATGAAAAAGCAGTCCTTCATTTAAAGAAAGCCTTGGAAATGGCTGAAGAAGAAA
AAAACAAACCAATGATTGCCCGGGCTCTTTATAACATCGGTGTTTGTTACTATAATCAAGATTTGTACGAGCAAGCGGTT
GATAATTTTCAAAAAGCAATTTCAATTTTTAAAGAAGAGGGCTTCATTAAATCCCTCCCGCAAGCATACTTTTTAATGAC
ACAAATTCAATTTAAACAAAAAAATAAGAAAAAAGCACAGCTCTTCTTTGATGAGGGATACGAACATTCAAATGAGGTTG
GTGACTCAATTTATGGCTTAAAGTTTGAGTTTTTAAAGGGTCTTTATATGGGGGATCCGGATAACAAAAAAATTGATCAT
TGCTTACTTCATTTGGAATCAAAAAAAATGTACCCTGATGTAGAGGATATGTCACTAGATGTGGCTAAATACTATCATGA
AAACAAATGTTTTGAAATGTCATCTCTCTACTTTTTAAAAGTTGAGGAGGCACGAAAACAAACACAGCGGGGGGATTGTT
TATATGAAGTTGAAGTTTAA
TTGACTGGAAAGATTTCTTCAGCGTCTGTCGGTGTGAAGATAAATGAATGGTATAGGTATATAAGGACTTTTAGTGTGCC
TGATGCCGAAATATTAAAGGCAGAGATTGAACGAGACATTCAAGAAATGGAAGAAGATCAAGATTTGCTTTTGTATTACT
CTTTAATGGACTTTAGGCATCGCATTATGCTTGAATACATTGCACCTGGCGAAAATTCTTCCTCGCGTCCGACAATTTCA
GAATTGTCGCGCAATATAGACAACAAACAGGCTCGTTTAAAAGGCATCCTTGAATATTATTATAATTTTTTCCGTGGTAT
GTATGAAAATGAAAAAAGAGAGTACATATCCGCCATTACTTACTATAAACAGGCAGAGAATAAACTTGCTCTTGTTGAAG
ACGAAGTGGAAAAAGCGGAGTTTTTCTTTAAAATTGCAGAAGTCTATTACTACATGAAACAGACATATTTTTCAATGCAT
TATGCACAAAAAGCTCTTGAGAGATATAGAGAACAAGAAACATACAATTTGAGAATTATCCAGTGCCATACAATAATGGC
CGGAAACTGGATCGATGCTAACAGATATGAAAAAGCAGTCCTTCATTTAAAGAAAGCCTTGGAAATGGCTGAAGAAGAAA
AAAACAAACCAATGATTGCCCGGGCTCTTTATAACATCGGTGTTTGTTACTATAATCAAGATTTGTACGAGCAAGCGGTT
GATAATTTTCAAAAAGCAATTTCAATTTTTAAAGAAGAGGGCTTCATTAAATCCCTCCCGCAAGCATACTTTTTAATGAC
ACAAATTCAATTTAAACAAAAAAATAAGAAAAAAGCACAGCTCTTCTTTGATGAGGGATACGAACATTCAAATGAGGTTG
GTGACTCAATTTATGGCTTAAAGTTTGAGTTTTTAAAGGGTCTTTATATGGGGGATCCGGATAACAAAAAAATTGATCAT
TGCTTACTTCATTTGGAATCAAAAAAAATGTACCCTGATGTAGAGGATATGTCACTAGATGTGGCTAAATACTATCATGA
AAACAAATGTTTTGAAATGTCATCTCTCTACTTTTTAAAAGTTGAGGAGGCACGAAAACAAACACAGCGGGGGGATTGTT
TATATGAAGTTGAAGTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
57.105 |
100 |
0.573 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
55.118 |
100 |
0.554 |